Gene Coch_0018 details

Gene Information

• Locus tag: Coch_0018
• ID: 8366418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: -
• Start bp: 19578
• End bp: 20315
• Gene Length: 738 bp
• Protein Length: 245 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 644982436
• Product: Ethyl tert-butyl ether degradation EthD
• Protein accession: YP_003140145
• Protein GI: 256818866

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAGA TTATAATGTT TGTGCGCAAG AAACAGCATC TTAGCACAGA AGAATTTATA 
AAACTATGGG AAGCACATTC TCAAAAAGTA ATAAACTATA AAGAAGCCCT GTTGATAAAG 
GATTATGCTA AAACATTTCC TTTTCAACCT ACTGATGAAA AATCGTCTAC ACAGCGAGAA 
ACCCTCCCTT TTACCTTTGA TGCTATGGGT GAATTGTGGT ATGAAAGTAA AGACGATTTT 
CTCAGAGCCC GAAACACTCC TGAGGGGCAA AAAGCCTTAG CCGACCTCCG TGCCGATGAA 
CTCAAATTTG TAGATATGGC AAACTCCGTA ATGTGGCTCG GTACTGAGGA AAGAATATTT 
GATAAATTGT CTTTTGAAGT TAAAAATTGG ACAGTTCTCG ATGAGTATTT CTATTTGTCA 
GATTATGCAG GAAATAGTGT AGCAGACTTT GATAAGTTAA TAGCTTTGTT TTCTGAAGAT 
ATTACAATGT TAAGTGCCGA TGGTTCACAA ATGAAAGGTA AAACTGCAGT AATCTCTTTT 
TTTAAACAAT TCTTTGAAAG AAATAAAACT ACAAAACATC TTTGGGAAAC CATTAAAGTT 
GCTGAAAATA CTCTTGAAAC TCATTGGGCT GTCTCAGGAA AACGAAAAGA TGGTACTTTC 
TTTGCCTTTA AAGGTAAAGA TACAGCAAAA CTAAATTCAG AAGGTAAAAT CAATTATTTA 
AAAGTAGAGT TTTTATAA 

 

Protein sequence

MFKIIMFVRK KQHLSTEEFI KLWEAHSQKV INYKEALLIK DYAKTFPFQP TDEKSSTQRE 
TLPFTFDAMG ELWYESKDDF LRARNTPEGQ KALADLRADE LKFVDMANSV MWLGTEERIF 
DKLSFEVKNW TVLDEYFYLS DYAGNSVADF DKLIALFSED ITMLSADGSQ MKGKTAVISF 
FKQFFERNKT TKHLWETIKV AENTLETHWA VSGKRKDGTF FAFKGKDTAK LNSEGKINYL 
KVEFL