| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0003 |
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| Symbol | |
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| ID | 8366402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2659 |
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| End bp | 4767 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644982420 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003140130 |
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| Protein GI | 256818851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TTTCAGCAGT ATTATTTTTA TTATTTATTT CATTTGCGTC TTGTAGTTTT
ACAAGTAAGA AATTTGACAA TCCAGATAAA GACAAGGATA GAGTGCTTTT GGACATTGTA
CAACACGTAC TGGAAAATGC GCATTTTAGT CCGATAAAAA TGGACGATGC TTTCTCTAAG
AAAGTATTTG ACAGTTATTT GAATAATATT GATGGGCAGA AGCGTTATTT TCTACAATCG
GATATCAACG AGTTAAAAAA GTACGAAAAC CGTTTGGACG ACGATTTGAA AAACGGAGAA
ATTGCATTCT TCAACCTTTC TTACGAACGC CTCAAACAAC GTATGAAAGA AGCAGAAGCA
ATTACCAAAG CTATCTTTGC TAAACCAATC AACCTGAATA CCAATGAAAC GATTAATACC
GACTATGAGA AGTTGCCTTT TGTAAAGAAC AAAGCTGAGT TACAAAACCG CTGGAAACAA
GTAATTATTT TCACTACACT TTCCACTTAT ATCACTAAAC AAAAGGAAGA AGCGAGCAAG
AAAGAAAAGG ACGCTAAATA TCAGCCTAAA ACCAATGAGG TGCTCAAAAA AGAATCGATA
GAAGCTACTC AAAAGACATT GGCTGATATG TTCAGTATGT ACAACGACAT CACTCGTGAA
GAGTGGTTCA GTATGTTTGT GAACGCTATT ACTGAGACTT TCGACCCCCA CTCCAACTAT
ATGGCACCAG ACATCAAAGA AGGTTTCGAC CGAGATATGT CGGGTAAGTT TGAAGGTATA
GGGGCACAAT TACAAAAGAA GACTGATGGA ATTGCTATTA CCAATGTGAT TTTGGGAGGG
CCAGTATGGA AAGGTAAACT CCTTGAAGTA GGCGACCAAA TCCTAAAAGT AGCACAAGGA
GCCGGTGAGC CCGTAGATGT AGTAGGAATG CGTTTAGACG ATGCGGTAAA ACTTATTAAA
GGGCCTAAGG GCACTGAAGT ACGCCTTACC GTAAAACGCG TAGACGGTAC AATAGTAGAC
GGTACAATAG AAGTAGTGTC TATCATTCGC GATGTGGTAG AAATTGAAGA AACTTATGCC
AAATCGGCAG TGATAACTGC TAATGGTAAA CGCTATGGAC TTATCAACTT ACCTAAATTC
TATATCGATT TTGAAGATGT AAACCAACGC AATGCTGCGA CTGATGTGGC TCTTGAAATA
GAAAAGCTCA AAAAAGAGAA TATAGACGGG CTTATTGTAG ATTTACGTAC CAATGGAGGG
GGCTCCTTAA AAACAGTAGT GGATATAGGA GGTTTATTTA TTCCTAAGGG ACCTATCGTA
CAAGTAAAAT CGTCGCGCGG AAGTCGTGAT GTGCTCTCTG ACAACGACCC TAAGACACAA
TGGGACGGTT CGTTGGTAAT CCTTACCAAT GAGCTTTCGG CATCAGCCTC AGAGATTTTG
GCAGCGGCTA TGCAAGACTA CAAACGCGCT ATCATCATAG GTGGTAAACA AACCTTTGGT
AAAGGTACCG TACAAAGTTT TGTAGACCTT AATAGTTTCT TGCGCCAAAA CAATTACGGC
GACCTTGGTG CTATAAAAAT TACTATTCAG AAGTTCTATC GTATCAACGG AGGGTCTACT
CAGCTAAAAG GTGTAGAAAG CGATATCGTA GTGCCTGATA AATACAAATA TATTGACATA
GGCGAACGCG ATATGCCCAA CGCTATGCCT TGGGATAAAA TAGAGCCTGC TAAGTACACT
CCTTGGACTA ACAATGCTAA CTTTGATAAG GCAATAGAAA ACAGCAAAAA ACGCATTAGT
GAAAATCAAT ACTTAAAGCT GATTGACGAA AATGCTCAAT GGATAAAACA ACAACAGAAA
GACAACGTTT TTCCTCTCAA CTACGAAGCT TACAAAAAAG TAATTGAGAA AAACGAAGAG
CAATCTAAAA AGTTCAAAGC AATTAACGAT TACAAATCTA ACTTGAAATT CACTTCAGTA
GCTTCTGATG AGGCTAAAAT AAAAAACAGT GAAGACTTGA AATTACGTCG TGATCGTTGG
CACGAAAGTC TTGAAAAAGA TGTGTATATA GATGAAGCTG TGAAAGTATT GGAAGATTTG
AACAAATAA
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| Protein sequence | MKNISAVLFL LFISFASCSF TSKKFDNPDK DKDRVLLDIV QHVLENAHFS PIKMDDAFSK
KVFDSYLNNI DGQKRYFLQS DINELKKYEN RLDDDLKNGE IAFFNLSYER LKQRMKEAEA
ITKAIFAKPI NLNTNETINT DYEKLPFVKN KAELQNRWKQ VIIFTTLSTY ITKQKEEASK
KEKDAKYQPK TNEVLKKESI EATQKTLADM FSMYNDITRE EWFSMFVNAI TETFDPHSNY
MAPDIKEGFD RDMSGKFEGI GAQLQKKTDG IAITNVILGG PVWKGKLLEV GDQILKVAQG
AGEPVDVVGM RLDDAVKLIK GPKGTEVRLT VKRVDGTIVD GTIEVVSIIR DVVEIEETYA
KSAVITANGK RYGLINLPKF YIDFEDVNQR NAATDVALEI EKLKKENIDG LIVDLRTNGG
GSLKTVVDIG GLFIPKGPIV QVKSSRGSRD VLSDNDPKTQ WDGSLVILTN ELSASASEIL
AAAMQDYKRA IIIGGKQTFG KGTVQSFVDL NSFLRQNNYG DLGAIKITIQ KFYRINGGST
QLKGVESDIV VPDKYKYIDI GERDMPNAMP WDKIEPAKYT PWTNNANFDK AIENSKKRIS
ENQYLKLIDE NAQWIKQQQK DNVFPLNYEA YKKVIEKNEE QSKKFKAIND YKSNLKFTSV
ASDEAKIKNS EDLKLRRDRW HESLEKDVYI DEAVKVLEDL NK
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