| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4487 |
|---|
| Symbol | |
|---|
| ID | 8393839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 4641310 |
|---|
| End bp | 4641828 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644982393 |
|---|
| Product | protein of unknown function Spy-related |
|---|
| Protein accession | YP_003140104 |
|---|
| Protein GI | 257062216 |
|---|
| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.214284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGTC GTCACCATAT CCTGTTCTTA TCCTTATTAA CAGTCCCTTT ACAAAGTTCC
GTTGTGTTGT CTGAACCTTT ATCCCAAAGA GACTGTTTAC CCTCTAATTG TCAGCATCAA
TGGTATAGCC AAAAACCCAA TGAAGGCGGA CGAAGAGGGG GAGGAAATCC TGATAAATTG
ATGGAGCAAC TCAACCTTAG TAATAGCCAA ATTCAACAAC TCAATACGAT TCGTCAAAAA
TACCGTCCCC AGATGGATGA AATGCGAGAA AAAATCGACA AAAGTCGTCA AGAATTGGAT
AAAATGATGC AGGGTAATTC TTCCGTTACA GACTTACGAA AAAAGCATCA AGAAGTTATA
AATTTAGACC AAAAACTGCA TAATTTACGC TTTGAAAGTA TGTTAGAAAT GCGGGCAGTT
TTAACGCCTG AACAACGAAC ACAATTTGCT CAGTTGATGC AACAGCGTCG AGAAAGTCGT
CGTAATAATC GGGGTAATGC CACTGAAGCG TCTCCCTAA
|
|---|
| Protein sequence | MKCRHHILFL SLLTVPLQSS VVLSEPLSQR DCLPSNCQHQ WYSQKPNEGG RRGGGNPDKL
MEQLNLSNSQ IQQLNTIRQK YRPQMDEMRE KIDKSRQELD KMMQGNSSVT DLRKKHQEVI
NLDQKLHNLR FESMLEMRAV LTPEQRTQFA QLMQQRRESR RNNRGNATEA SP
|
|---|
| |