Gene Cyan8802_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4481 
SymbolaroE 
ID8393833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4636061 
End bp4636927 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content44% 
IMG OID644982387 
Productshikimate 5-dehydrogenase 
Protein accessionYP_003140098 
Protein GI257062210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.148819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACAA TTACTGGAAA AACTAAATTA TTAGGAATTA TTGGCTATCC TGTAGAACAT 
TCCCTATCCC CGGTGATGCA CAATGCAGCG ATTAGCCATT TAGGGCTAGA TTATCTTTAT
GTCCCCTTTC CGGTGAACCC CGACAATTTA GAGACAGCGA TCGCCGGATT AGCGACTCTC
GGTGTCCTGG GATTTAATGT GACCATTCCC CATAAACAAG CCATTATTCC CTACCTTTCA
GAAGTCACTG CAACCGCTAC TATGGTAGGG GCAGTCAATA CCATTTGGAA AGGCGAAAAC
GGCTGGAAAG GGACTAATAC GGATATAGAC GGCTTTTTAT CTCCCCTGAA ACGCTTACAA
CGAGACTGGA GGAAGATAAC CCCTATCATC CTAGGCCATG GCGGCGCAGC AAGGGCAGTT
GTGGTAGCAT TGGCTCAACT AGGATGCCCG ACAATTGGCG TTGTAGGACG GGATCAAGAC
AAGTTAGGGC AATTTCAACA AAGTTGGCAA AACACCGACC TTACAGCCCA TTTAACCCTC
CATTCCTGGG ACGAATTACC AAGACTCATA GAGACGACAG ACTTATTAAT CAATACTACT
CCCATCGGGA TGTCTCCGAA TATTGATGCT TCTCCGATTG ATGCAACCCT GTTCACTAAA
ATGAACCAAA AGGCGATTGT CTACGATCTC ATTTATAACC CCAATCCTAC CCAATTACTC
CAAGATGCAC AACAACAAGG GATAATGATC ATTGATGGAT TAGAAATGTT GATTGAGCAA
GGGGCAGTCG CTTTAGCATT ATGGTTGCAA CAACCTGTTC CTGTTGACAT TATGACCCAA
GCTTTACGGC ATTATCTAAA TCTATGA
 
Protein sequence
MLTITGKTKL LGIIGYPVEH SLSPVMHNAA ISHLGLDYLY VPFPVNPDNL ETAIAGLATL 
GVLGFNVTIP HKQAIIPYLS EVTATATMVG AVNTIWKGEN GWKGTNTDID GFLSPLKRLQ
RDWRKITPII LGHGGAARAV VVALAQLGCP TIGVVGRDQD KLGQFQQSWQ NTDLTAHLTL
HSWDELPRLI ETTDLLINTT PIGMSPNIDA SPIDATLFTK MNQKAIVYDL IYNPNPTQLL
QDAQQQGIMI IDGLEMLIEQ GAVALALWLQ QPVPVDIMTQ ALRHYLNL