Gene Cyan8802_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4406 
Symbol 
ID8393758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4548520 
End bp4549572 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content37% 
IMG OID644982315 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003140026 
Protein GI257062138 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.804471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00122812 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTAA CTTTTGACCT TTTTACTGTT CATAAACGCT TTGCTTTAAC AATTAGTCGA 
GGAACCTATA CAGAAAATAC CAACATTGGG TTAAAAATTG AATCCGAAGG GGTTGAAGGA
TTGGGAGAAG CCACTCCTTT TTCTGTCGTT AATGGCAAAG AAAAAAACAG CGAACAATTA
CAACAAGAAT TAGAGAAACT CATCCCAATT ATAGAACCTT TTCATCCGCT CGAAAATCAA
GAAATTGAAG GAATTTTAAA ACAAAATAAT GTTAGCTCAT CTCTACGCGC TGCCATTGAT
ACTGCGCTGT ATGATTGGGT AGGAAAAAAA GTCAATTTAC CGCTATGGAA AATTTGGGGA
TTAAACCGCG ATCGCATTCC TCCGACTTCC GTTACCATTG GTATTAGTTC CCCTGAAAAA
GCCGTCGAAA GAGTCAGAAA TTGGCTCAAT TTTATGGACG CTAAGGTCTT AAAAATTAAG
TTGGGTTCTC CCGATGGGAT AGAAGCAGAT AAAGCTATGT TATTAGCCAT TCGTCAAGAA
TGTCCTAATC TCCCTTTAAC CGTTGATGCG AATGGGGGAT GGAATTTAAA AGAGGCGATT
TTAATGAGTG AGTGGTTAGC AACGCAAAAT GTTAAATATA TTGAACAACC TTTTGCCGTT
GGAGAGGAGA GCAATTTACC CCAATTGTAT CAGCGATCGC CGCTTCCTAT TTTTATTGAT
GAAAGTTGTT TTAATAGTGA AGATATTATT ACCTATTCTC CCTCTATTCA TGGCATTAAT
ATTAAACTAA TGAAAGCCGG AGGGTTAAGC GAAGTCATGA GGATGATTGC GATAGCTAAA
GCGTGTAAAC TACAGATTAT GTATGGGTGT TATTCTGATA GTAGTTTAGC CAATACTGCG
CTGTGTCATC TTGCTCCTTA TGCGGATTAT TTAGACTTAG ATAGTCATTT AAACTTAATT
GATGATCCCT TTCAAGGGGT TAGTTTAGAA AGAGGAAGAT TAGTCCTTAA TAATTTACCA
GGATTAGGGG TAAAATATAG AAATGAAACC TAA
 
Protein sequence
MRVTFDLFTV HKRFALTISR GTYTENTNIG LKIESEGVEG LGEATPFSVV NGKEKNSEQL 
QQELEKLIPI IEPFHPLENQ EIEGILKQNN VSSSLRAAID TALYDWVGKK VNLPLWKIWG
LNRDRIPPTS VTIGISSPEK AVERVRNWLN FMDAKVLKIK LGSPDGIEAD KAMLLAIRQE
CPNLPLTVDA NGGWNLKEAI LMSEWLATQN VKYIEQPFAV GEESNLPQLY QRSPLPIFID
ESCFNSEDII TYSPSIHGIN IKLMKAGGLS EVMRMIAIAK ACKLQIMYGC YSDSSLANTA
LCHLAPYADY LDLDSHLNLI DDPFQGVSLE RGRLVLNNLP GLGVKYRNET