Gene Cyan8802_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4402 
Symbol 
ID8393754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4544003 
End bp4545490 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content38% 
IMG OID644982311 
Product9-cis-epoxycarotenoid dioxygenase 
Protein accessionYP_003140022 
Protein GI257062134 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000371573 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAACC TATTAATTAA AGAAGAAAAC GAAAGCTATT ATAACCAAGA AGAATGGCAA 
CGAGGATATC AATCCCAACC GAATGAATAT GACTATTGGG TTGAGGATAT TGAGGGAAAA
ATTCCCCCTG AATTACAGGG AACCTTGTTT CGCAATGGAC CTGGTTTATT AGAGGTTCAA
GGAGTCCCCC TTAAGCATCC GTTTGATGGA GATGGAATGG TTTGTGCTAT TTCTTTTTTA
CCCGATGGAC GAGTCCATTT TCGGAATCGT TTTGTGCGGA CTGAAGGTTA TGTCAAAGAA
CAGGAAGCTC AAAAAATGCT GTATCGGGGG GTTTTTGGGA CACAGAAACC AGGGGGATGG
TTAAATAATT TGTTTGACCT AAAAATCAAA AATATTGCCA ATACAAATAT TATTTATTGG
GGAGAAAAAC TCCTAGCACT TTGGGAAGCA GGACAGCCTT ATCGCTTAGA TCCAAACACC
TTAGAAACGT TAGGAATTGA TGATCTTGAT GGTGTAATCG CTGATAACGG ATCAATTTCT
GCTCATCCTT GTCTTGATCC CCATTGTGAG TTAGATAAGG GTCAACCTTG TTTAGTTAAT
TTTTCCATTA AACCGGGACT TTCTAGTACC ATTACTGTCT ATGAATTTAA TCCCCAAGGG
CAATTATTAC GCTGTCATTC TCATATTACT CCAGGCTTTT GTTTTATCCA TGATTTTGCC
ATTACTGAAC ATTATTGTAT TTTCTTACAA AATGCTGTAA CTTTTAATCC TATTCCCTAT
ATTTTAGGAT TAAAAGGAGC CGGAAACTGT GTTAAATTTC AACCAAATCA ACCGAGTCGG
TTTATTATTA TTCCCCGTGT TCCTCCTTAT AAACAAGTGA AAATAATAGA GGCAAAAGCG
GGATTTGTTT TCCATCATGC TAATGCGTTT GAAGTCAAAG ATAAGATTTA TCTTGACTCA
ATTGCCTATA ATTCTTTGCC AGAACTTCAA CCGAATAGAA GCTATTTAGA GATCGATTTT
GATCAAATAG ATCCCTCCCA ATTATGGCGA TTTACTCTTG ATTTGAATAA CACTACTGTA
CAAAGTCAAA AATTAAGCGA TCGCCCTTGT GAATTTCCAG TTATTAACCC CCAGAAAGTC
GGTCAAAACT ACCGTTATAT ATATCTCAAT GCTTCCCACC ATCCGACAGA AAATTCCCCC
TTTCAAGCGA TTCTTAAAGT TGATCTAGAA ACCCAACAAC AAGAGATCCA TTCTTTCGCA
CCTACGGGTT ATGTAGGGGA ACCGATTTTT GTCCCTCATC CTAATGGTAT TACTGAGGAT
GATGGCTGGT TATTAGTAAT GGTTTATAAT GGGACTCTTC ATCGTTCTGA TCTGGTGATT
TTAGACGCAA AAGACTTAAG TAAACCCCCC ATTGCGCGAG TCCATTTAAA ACATCATATC
CCCTATGGAT TACATGGGAG TTGGACTTCT GAAATAATTG ATCATTGA
 
Protein sequence
MTNLLIKEEN ESYYNQEEWQ RGYQSQPNEY DYWVEDIEGK IPPELQGTLF RNGPGLLEVQ 
GVPLKHPFDG DGMVCAISFL PDGRVHFRNR FVRTEGYVKE QEAQKMLYRG VFGTQKPGGW
LNNLFDLKIK NIANTNIIYW GEKLLALWEA GQPYRLDPNT LETLGIDDLD GVIADNGSIS
AHPCLDPHCE LDKGQPCLVN FSIKPGLSST ITVYEFNPQG QLLRCHSHIT PGFCFIHDFA
ITEHYCIFLQ NAVTFNPIPY ILGLKGAGNC VKFQPNQPSR FIIIPRVPPY KQVKIIEAKA
GFVFHHANAF EVKDKIYLDS IAYNSLPELQ PNRSYLEIDF DQIDPSQLWR FTLDLNNTTV
QSQKLSDRPC EFPVINPQKV GQNYRYIYLN ASHHPTENSP FQAILKVDLE TQQQEIHSFA
PTGYVGEPIF VPHPNGITED DGWLLVMVYN GTLHRSDLVI LDAKDLSKPP IARVHLKHHI
PYGLHGSWTS EIIDH