Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4355 |
Symbol | ispD |
ID | 8393707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4506984 |
End bp | 4507670 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644982265 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_003139976 |
Protein GI | 257062088 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.263369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTTAT TAATTCCGGC TGCTGGACTA GGGAAACGCA TGGGAAGCGA TCGCAATAAA CTACTCCTTA CAGTCTTAGA AAAACCCTTG TTAAGTTGGA CACTCCTGGC TGCGGAAGTA TCCTCAGAAA TTCACTGGAT TGGTCTTATC GGTCAATCCT ATGATTTCCC TAACTTTAAA ACCATTTTAT CCGATCTTTG TTTAACTAAA CCCGTTGAAT TAATTCAAGG GGGAAATACG CGACAAGAAT CCGTTTACAA TGGGTTACAA GCGTTACCTC CAGACGCGGA ACGGGTATTA ATTCATGATG GGGCTAGATG TTTAGCAACT CCAGAATTGT TTAATCGGTG TGCAAGGCAA TTATTGACTT GTCAGGGGTT AATTGCTGCC ATTCCCGTGA AAGATACCAT TAAGGTTGTT GACCATGATA ATATAGTTAA AAGCACTCCT GATCGCGCTC AATTATGGGC TGCCCAAACA CCCCAAGGAT TCGAGGTTAA ACGGTTAAAA GAATGTCATG AAAAGGGACG TAGTTTAGGA TGGGAAGTGA CTGACGATGC TGCTTTATTT GAAAAGTGTC AGTTACCCGT TAAAATTGTT GAAGGCGAGG AAACCAATTT AAAAGTAACC ACCCCTATTG ATTTAACGTT AGCTGAATTT ATTCTTAAAC AACGAATTAA TCAATAA
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Protein sequence | MYLLIPAAGL GKRMGSDRNK LLLTVLEKPL LSWTLLAAEV SSEIHWIGLI GQSYDFPNFK TILSDLCLTK PVELIQGGNT RQESVYNGLQ ALPPDAERVL IHDGARCLAT PELFNRCARQ LLTCQGLIAA IPVKDTIKVV DHDNIVKSTP DRAQLWAAQT PQGFEVKRLK ECHEKGRSLG WEVTDDAALF EKCQLPVKIV EGEETNLKVT TPIDLTLAEF ILKQRINQ
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