Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4241 |
Symbol | |
ID | 8393593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4378019 |
End bp | 4379812 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644982152 |
Product | GTP-binding protein TypA |
Protein accession | YP_003139863 |
Protein GI | 257061975 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.972345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000558258 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCTTC CCATTCGCAA CGTTGCCATC ATCGCCCACG TCGATCACGG TAAAACCACC CTGGTTGATG CCCTCCTCAA GCAGTCCGGT ATCTTCCGCG AAGGAGAAGA CATCCCTGAC TGTGTTATGG ATTCCAATAC CCTTGAACGG GAACGGGGAA TCACCATTTT GTCCAAAAAT ACCGCCGTTC GCTACAATGA CACCCTCATC AACATTGTAG ATACCCCTGG TCACGCAGAC TTTGGGGGAG AAGTCGAACG AGTTCTCGGG ATGGTCGATG GTTGCATCCT AATTGTAGAT GCTAACGAAG GCCCCATGCC CCAAACCCGT TTTGTCCTCA AAAAAGCCTT AGAAAAGGGG TTACGTCCCA TCGTTGTCGT CAACAAAATT GACCGTCCCC AAGCAGACCC CAACATTGCC GTTGATAAAG TCTTCGATCT CTTCGTCGAA TTAGGGGCAG ACGATGATCA ATGCGATTTT ACCACCCTGT TTGCGTCAGG ATTATCGGGT TACGCCAAAG AAACCCTAGA AGAAGAAGGG GTAGACATGA AACCCCTGTT TGAAGCGATT TTACACCATG TTCCGCCACC GGCCGGAGAC GTTAACAAAC CCCTCCAGTT GCAAGTGACC ACCCTCGACT ATTCCGACTA CTTAGGACGC ATCATCATCG GACGCATCCA TAACGGAACC ATCAAAGCGG GACAACAAGC TGCCTTAATG AAAGAAGATG GCAGCATTGT CCGAGGAAAA ATCAGTAAAT TACTCGGTTT TGAAGGACTG CAACGGGTAG AAATGCAAGA AGCATCCGCA GGGTATATTG TCGCGGTTGC CGGGTTCGCT GATGCTAACA TCGGAGAAAC CCTCACTTGT CCCAACGAAC CCCAAGCGTT ACCCTTAATC AAGGTCGATG AACCCACCTT ACAGATGACC TTCTCCGTCA ACGACTCCCC CTTTGCCGGA CAAGAAGGAA AATTCGTCAC CTCCCGTCAG ATCCGCGATC GCTTACACCG AGAATTAGAA ACTAACGTGG CCTTGCGAGT CGAAGACACC GACTCCCCCG ATAAATTCGC CGTATCGGGA CGGGGAGAAC TCCATTTAGG TATTCTCATC GAAACCATGC GTCGGGAAGG ATATGAGTTC CAAGTCTCCC AACCCCAAGT GATCTATCGG GAAGTCAACG GACAACCCTG CGAACCCTAC GAGTACCTAG TCTTAGATGT CCCCGAAGAA GCGGTGGGGG CAAGTATCGA ACGCTTAGGA CAACGCAAAG GGGAAATGCA GGATATGCAA ACGGGAACTA ATGGACGGAC ACAATTAGAA TTTGTTGTCC CGGCCCGGGG GTTAATTGGG TTCCGTGGTG AGTTCATCCG TCTGTCACGG GGTGAGGGTA TTATGAACCA CAGTTTCCTC GAATATCGTC CCTTTTCGGG TGAATTGGCA ACCCGTTACA ATGGGGTTAT CACCTCCTTT GAAGAAGGGG TAGCGACTTT CTATGCGTTG CAAAATGCGG AAGATCGCGG CGTATTCTTT ATTACCCCTG GTACTAAAGT GTATAAAGGG ATGATCATTG GAGAAAGTAA CCGCCCCCAA GATGTGGAAT TGAATATCTG CAAAACCAAG CAATTAACCA ACCATCGTTC GGCAACAGGG GATGAATTAG TTCAACTCCA AGCCCCCGAA GAAATGAGTC TAGAACGGGC ACTAGAATAT ATTGGACCCG ATGAATTGGT TGAGGTAACA CCCCAGTCTA TTCGACTCCG AAAAATGAAA GCCCAAAAAT TAGTTAAACG CTAA
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Protein sequence | MSLPIRNVAI IAHVDHGKTT LVDALLKQSG IFREGEDIPD CVMDSNTLER ERGITILSKN TAVRYNDTLI NIVDTPGHAD FGGEVERVLG MVDGCILIVD ANEGPMPQTR FVLKKALEKG LRPIVVVNKI DRPQADPNIA VDKVFDLFVE LGADDDQCDF TTLFASGLSG YAKETLEEEG VDMKPLFEAI LHHVPPPAGD VNKPLQLQVT TLDYSDYLGR IIIGRIHNGT IKAGQQAALM KEDGSIVRGK ISKLLGFEGL QRVEMQEASA GYIVAVAGFA DANIGETLTC PNEPQALPLI KVDEPTLQMT FSVNDSPFAG QEGKFVTSRQ IRDRLHRELE TNVALRVEDT DSPDKFAVSG RGELHLGILI ETMRREGYEF QVSQPQVIYR EVNGQPCEPY EYLVLDVPEE AVGASIERLG QRKGEMQDMQ TGTNGRTQLE FVVPARGLIG FRGEFIRLSR GEGIMNHSFL EYRPFSGELA TRYNGVITSF EEGVATFYAL QNAEDRGVFF ITPGTKVYKG MIIGESNRPQ DVELNICKTK QLTNHRSATG DELVQLQAPE EMSLERALEY IGPDELVEVT PQSIRLRKMK AQKLVKR
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