Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4198 |
Symbol | |
ID | 8393549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4327539 |
End bp | 4330175 |
Gene Length | 2637 bp |
Protein Length | 878 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644982113 |
Product | alpha amylase catalytic region |
Protein accession | YP_003139825 |
Protein GI | 257061937 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGATC TCGTTGTCCA TTTTAAAAAG CCCAAGGGAT GGCAAAATAC CATCAATATT CATTATTGGG ATACTCACCC CGTTTCCCGT GCCACTCAAT GGCCGGGAGT TCCCATGACA GAAGAAGATC ATGACTGGTT TGTCTATCGT TTTGAGGCAA TAGAGGGAGC AAACATCGTT TTTAATGATA GCAGAGGACA ACAGACACAA AACCTGAAAA GAGAGAAAGA AGGCTGGTTT TTTGAGAATA ACACTTGGTA CGATCAAAAC CCAGAAGGTC CGACTATCCC TGTTATTATT GCTCGTCCCA AAGGCGGAAC CTACCTCAGC ACACAACAAA TTTTTCTAGA AAGTAGTAAC CGTGACGATA CCATCTATTT TACCCTCGAT GGAACTCAAC CGACTACGGC ATCCCAACGC TACAGCAATC CTATTACTAT CGATCAAACA GCGACTTTGT TAACCTTTGG GGTTAATTCC CAAGGAGAAA CCGGAACTCT CGAATCGTTT ATTTATACCA TAGATCCCAA CGCAGACTTA GAACCGCCGA CCATTACTGC TAATTTCGAC TCAAATACCT ACAACAAGCC GATTTTAGTT GTTTTTACCG TCAGCGACAA CCATGCCAAA CCCGTGACCG CTTACTATAC CACCGACGGA ACAGAACCCA CACCACAATC TGAGGTTTAT GTCCAAGGTA ACGCTATGAA TGGGTTAATG GGTAAGCAAT TTAGTATCCA AGAAAGTACC CAAATTCGCT TTCTAGTTAT TGATGGTGCA GGGAATGAAA CCCATGCAAC TTTTTACTAC AATATTCAAA AAGGAACAAA ATCGACCGAT TTCCGCGAAG AAACCATTTA CTTTTTGTTA CCCACTCGCT TTTATGATGG TGATCCCAGT AATAACTTTT TTTGCCGCGA TCGCATCAAG TTTAACCGCG AAACCGGAGA ACCGGAAGAT CCCCATTGGC GCGGAGATTT CAAAGGATTA ATCGAAAAAC TCGACTATAT CAAAGAATTA GGCTTTACCG CCATTTGGAT CACCCCCCCG ATCGAAAACC GTAGCGGACT CGACTACCAT GGCTATCATG GCTATGATTG GACAAAAATT GACCCCCGAC TGGAATCTCC CGATGCTACC TATCAAGATT TAATCGACGA AATTCACGCC AGAGGGATGA AAATCATCCA AGATGTGGTG GTTAACCATT CTTCCCAATA CGGCATTCGG GGGAAAGTTT GGATCGATCA TTTACCGATC AAATATTATG TCCCCCAAGG ATCACAGCAG GGGCAAATTA ATTATGGTCC CTATCAAGGG AATTTTGGCA ATTACACCCA TCCTTTCCGC GAAGATAACG ATAACCCTGT CGCGCCGGAA TGGTTCCGAG AACGGCAAAA TTCTGACCCT GAAGGCATCG TTCCCTTAGT TGATCCTTTA ACGGGAGAAA CGGTTCCTAA ACCGGGGTAT AATCCTAATC GCTTTTTTGG CATCGATGCA AATACCCTCG ATCCCCAATG GTATCATCAA GACGGCTTTA TGGCGGGAGG AGACTGGGAA AGTGCCTCCA TTCAAACAAA ACACATGGCC GGGGATACTA TCGATCTTTA CACAGAAAAA CAGAACGTCA AAGATTATCT GATTAACGCG ATTTGCCGTT ATTTAGATAT GGGGGTAGAT GCCTTACGAC TCGATACCGT TAAGCACGTT GAACGGGGGA ATCTTCTGGA ATATATTAAT GCTTGGAAAG CCTATAAACC CGGTTTATTT GTGTTTGGTG AAAATTTAGT CAAAGGGAGT GGTTGGGGTG ATTTATTTGG TGATGATAAC GCCCCCTCGT TTATTCGTCC CTGGTGGTAT ACTCGCTTAG GAAATGATGT CAGAGATCCC AATTCAGGCG GAGATTCCGG GTTTTCGGTG TTAGATTTTT CCCTATTTTC CACCTTTCGA GATAATGTTA GTAAGGGAAG TTATAGTGGC ATTGGTGGGA TTTTATCGAG AGATTGGGTA TACGGGGATG CAACAACATT AGTCACCTTT TTACAAAACC ACGATGTCGG ACCCGATAAT GATTTTCGCT TCCGTTTTCG GGGTGATCAA TGGATGGCTG CGGCGACCTA CAATATGCTA TGGACAATTC GGGGGATTCC TTGTCTGTAT TATGGGGAAG AAATCGAATT TATGAAAGGT GCCCCCCAAG ATATTATCGG CAATGATGAT ACGTTAGATC AAACAGGACG GGCTTATTTT GGGGATTATT TAACCGATGA AGCGATCGGG ACAACCCAAA GTCATCCCCT CTATCAGCAT ATCAAACGGT TAAACTTGAT TCGTCGTAGC ATTCCGGCCT TACAAAAAGC CCCCATGAGT CAGGTAAATG AATGGGGTAG TGGCATGAGT TTTATTCGAG ATTATAACAA CGGAGAAAGT TATGCCGTGG TTGGGTTAGC CATGGGAGGA CAACAAACCA TTACCGTTAG CAATGTTCGC AATGGCAATT ATGTTGATGC GGTGACGGGT CATACCATCA ATGTCAGTGG GGGTTCTCTT TCCTTTTCCG TTCAGGGTAA TTCGGCGGGA ATTTATGTCC TCAATGGCTT TGGAAAAATT GGTGACGATG GGGTTTATTT ACGTTGA
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Protein sequence | MPDLVVHFKK PKGWQNTINI HYWDTHPVSR ATQWPGVPMT EEDHDWFVYR FEAIEGANIV FNDSRGQQTQ NLKREKEGWF FENNTWYDQN PEGPTIPVII ARPKGGTYLS TQQIFLESSN RDDTIYFTLD GTQPTTASQR YSNPITIDQT ATLLTFGVNS QGETGTLESF IYTIDPNADL EPPTITANFD SNTYNKPILV VFTVSDNHAK PVTAYYTTDG TEPTPQSEVY VQGNAMNGLM GKQFSIQEST QIRFLVIDGA GNETHATFYY NIQKGTKSTD FREETIYFLL PTRFYDGDPS NNFFCRDRIK FNRETGEPED PHWRGDFKGL IEKLDYIKEL GFTAIWITPP IENRSGLDYH GYHGYDWTKI DPRLESPDAT YQDLIDEIHA RGMKIIQDVV VNHSSQYGIR GKVWIDHLPI KYYVPQGSQQ GQINYGPYQG NFGNYTHPFR EDNDNPVAPE WFRERQNSDP EGIVPLVDPL TGETVPKPGY NPNRFFGIDA NTLDPQWYHQ DGFMAGGDWE SASIQTKHMA GDTIDLYTEK QNVKDYLINA ICRYLDMGVD ALRLDTVKHV ERGNLLEYIN AWKAYKPGLF VFGENLVKGS GWGDLFGDDN APSFIRPWWY TRLGNDVRDP NSGGDSGFSV LDFSLFSTFR DNVSKGSYSG IGGILSRDWV YGDATTLVTF LQNHDVGPDN DFRFRFRGDQ WMAAATYNML WTIRGIPCLY YGEEIEFMKG APQDIIGNDD TLDQTGRAYF GDYLTDEAIG TTQSHPLYQH IKRLNLIRRS IPALQKAPMS QVNEWGSGMS FIRDYNNGES YAVVGLAMGG QQTITVSNVR NGNYVDAVTG HTINVSGGSL SFSVQGNSAG IYVLNGFGKI GDDGVYLR
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