Gene Cyan8802_4198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4198 
Symbol 
ID8393549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4327539 
End bp4330175 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content44% 
IMG OID644982113 
Productalpha amylase catalytic region 
Protein accessionYP_003139825 
Protein GI257061937 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC TCGTTGTCCA TTTTAAAAAG CCCAAGGGAT GGCAAAATAC CATCAATATT 
CATTATTGGG ATACTCACCC CGTTTCCCGT GCCACTCAAT GGCCGGGAGT TCCCATGACA
GAAGAAGATC ATGACTGGTT TGTCTATCGT TTTGAGGCAA TAGAGGGAGC AAACATCGTT
TTTAATGATA GCAGAGGACA ACAGACACAA AACCTGAAAA GAGAGAAAGA AGGCTGGTTT
TTTGAGAATA ACACTTGGTA CGATCAAAAC CCAGAAGGTC CGACTATCCC TGTTATTATT
GCTCGTCCCA AAGGCGGAAC CTACCTCAGC ACACAACAAA TTTTTCTAGA AAGTAGTAAC
CGTGACGATA CCATCTATTT TACCCTCGAT GGAACTCAAC CGACTACGGC ATCCCAACGC
TACAGCAATC CTATTACTAT CGATCAAACA GCGACTTTGT TAACCTTTGG GGTTAATTCC
CAAGGAGAAA CCGGAACTCT CGAATCGTTT ATTTATACCA TAGATCCCAA CGCAGACTTA
GAACCGCCGA CCATTACTGC TAATTTCGAC TCAAATACCT ACAACAAGCC GATTTTAGTT
GTTTTTACCG TCAGCGACAA CCATGCCAAA CCCGTGACCG CTTACTATAC CACCGACGGA
ACAGAACCCA CACCACAATC TGAGGTTTAT GTCCAAGGTA ACGCTATGAA TGGGTTAATG
GGTAAGCAAT TTAGTATCCA AGAAAGTACC CAAATTCGCT TTCTAGTTAT TGATGGTGCA
GGGAATGAAA CCCATGCAAC TTTTTACTAC AATATTCAAA AAGGAACAAA ATCGACCGAT
TTCCGCGAAG AAACCATTTA CTTTTTGTTA CCCACTCGCT TTTATGATGG TGATCCCAGT
AATAACTTTT TTTGCCGCGA TCGCATCAAG TTTAACCGCG AAACCGGAGA ACCGGAAGAT
CCCCATTGGC GCGGAGATTT CAAAGGATTA ATCGAAAAAC TCGACTATAT CAAAGAATTA
GGCTTTACCG CCATTTGGAT CACCCCCCCG ATCGAAAACC GTAGCGGACT CGACTACCAT
GGCTATCATG GCTATGATTG GACAAAAATT GACCCCCGAC TGGAATCTCC CGATGCTACC
TATCAAGATT TAATCGACGA AATTCACGCC AGAGGGATGA AAATCATCCA AGATGTGGTG
GTTAACCATT CTTCCCAATA CGGCATTCGG GGGAAAGTTT GGATCGATCA TTTACCGATC
AAATATTATG TCCCCCAAGG ATCACAGCAG GGGCAAATTA ATTATGGTCC CTATCAAGGG
AATTTTGGCA ATTACACCCA TCCTTTCCGC GAAGATAACG ATAACCCTGT CGCGCCGGAA
TGGTTCCGAG AACGGCAAAA TTCTGACCCT GAAGGCATCG TTCCCTTAGT TGATCCTTTA
ACGGGAGAAA CGGTTCCTAA ACCGGGGTAT AATCCTAATC GCTTTTTTGG CATCGATGCA
AATACCCTCG ATCCCCAATG GTATCATCAA GACGGCTTTA TGGCGGGAGG AGACTGGGAA
AGTGCCTCCA TTCAAACAAA ACACATGGCC GGGGATACTA TCGATCTTTA CACAGAAAAA
CAGAACGTCA AAGATTATCT GATTAACGCG ATTTGCCGTT ATTTAGATAT GGGGGTAGAT
GCCTTACGAC TCGATACCGT TAAGCACGTT GAACGGGGGA ATCTTCTGGA ATATATTAAT
GCTTGGAAAG CCTATAAACC CGGTTTATTT GTGTTTGGTG AAAATTTAGT CAAAGGGAGT
GGTTGGGGTG ATTTATTTGG TGATGATAAC GCCCCCTCGT TTATTCGTCC CTGGTGGTAT
ACTCGCTTAG GAAATGATGT CAGAGATCCC AATTCAGGCG GAGATTCCGG GTTTTCGGTG
TTAGATTTTT CCCTATTTTC CACCTTTCGA GATAATGTTA GTAAGGGAAG TTATAGTGGC
ATTGGTGGGA TTTTATCGAG AGATTGGGTA TACGGGGATG CAACAACATT AGTCACCTTT
TTACAAAACC ACGATGTCGG ACCCGATAAT GATTTTCGCT TCCGTTTTCG GGGTGATCAA
TGGATGGCTG CGGCGACCTA CAATATGCTA TGGACAATTC GGGGGATTCC TTGTCTGTAT
TATGGGGAAG AAATCGAATT TATGAAAGGT GCCCCCCAAG ATATTATCGG CAATGATGAT
ACGTTAGATC AAACAGGACG GGCTTATTTT GGGGATTATT TAACCGATGA AGCGATCGGG
ACAACCCAAA GTCATCCCCT CTATCAGCAT ATCAAACGGT TAAACTTGAT TCGTCGTAGC
ATTCCGGCCT TACAAAAAGC CCCCATGAGT CAGGTAAATG AATGGGGTAG TGGCATGAGT
TTTATTCGAG ATTATAACAA CGGAGAAAGT TATGCCGTGG TTGGGTTAGC CATGGGAGGA
CAACAAACCA TTACCGTTAG CAATGTTCGC AATGGCAATT ATGTTGATGC GGTGACGGGT
CATACCATCA ATGTCAGTGG GGGTTCTCTT TCCTTTTCCG TTCAGGGTAA TTCGGCGGGA
ATTTATGTCC TCAATGGCTT TGGAAAAATT GGTGACGATG GGGTTTATTT ACGTTGA
 
Protein sequence
MPDLVVHFKK PKGWQNTINI HYWDTHPVSR ATQWPGVPMT EEDHDWFVYR FEAIEGANIV 
FNDSRGQQTQ NLKREKEGWF FENNTWYDQN PEGPTIPVII ARPKGGTYLS TQQIFLESSN
RDDTIYFTLD GTQPTTASQR YSNPITIDQT ATLLTFGVNS QGETGTLESF IYTIDPNADL
EPPTITANFD SNTYNKPILV VFTVSDNHAK PVTAYYTTDG TEPTPQSEVY VQGNAMNGLM
GKQFSIQEST QIRFLVIDGA GNETHATFYY NIQKGTKSTD FREETIYFLL PTRFYDGDPS
NNFFCRDRIK FNRETGEPED PHWRGDFKGL IEKLDYIKEL GFTAIWITPP IENRSGLDYH
GYHGYDWTKI DPRLESPDAT YQDLIDEIHA RGMKIIQDVV VNHSSQYGIR GKVWIDHLPI
KYYVPQGSQQ GQINYGPYQG NFGNYTHPFR EDNDNPVAPE WFRERQNSDP EGIVPLVDPL
TGETVPKPGY NPNRFFGIDA NTLDPQWYHQ DGFMAGGDWE SASIQTKHMA GDTIDLYTEK
QNVKDYLINA ICRYLDMGVD ALRLDTVKHV ERGNLLEYIN AWKAYKPGLF VFGENLVKGS
GWGDLFGDDN APSFIRPWWY TRLGNDVRDP NSGGDSGFSV LDFSLFSTFR DNVSKGSYSG
IGGILSRDWV YGDATTLVTF LQNHDVGPDN DFRFRFRGDQ WMAAATYNML WTIRGIPCLY
YGEEIEFMKG APQDIIGNDD TLDQTGRAYF GDYLTDEAIG TTQSHPLYQH IKRLNLIRRS
IPALQKAPMS QVNEWGSGMS FIRDYNNGES YAVVGLAMGG QQTITVSNVR NGNYVDAVTG
HTINVSGGSL SFSVQGNSAG IYVLNGFGKI GDDGVYLR