Gene Cyan8802_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_4178 
Symbol 
ID8393529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4310097 
End bp4310690 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID644982093 
ProductWD40 domain protein beta Propeller 
Protein accessionYP_003139805 
Protein GI257061917 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC GTCCTAAGAG ATTTCATCAA TCCTTAACGC TATTACTATT ACTCAGTAGT 
TTGACCCTAG GGTTAGGTAG CTGTCAACCA GGGACTTTTA TTACTCCCCC AACTCTGGAA
CTCGGATCAG CATTAAATAG CCGTTCCGCA GAAGAGTTTC CGCGTTTTTC TTACGATGGA
CGCTACTTAG TCTTTGCTTC TGATCGGCAA GGACAAAGGG GAATTTGGCT TTATGATCGC
CTCAATAATC GTTTATTACC CTTACCTGGG ATTAATCAAC CCGGCACTCG TCAGGATCAA
CCCGATATTA GTAGCGACGG TCGGTACATT GTCTATGTTT CCGAACAAGA GGGTAAACCC
GATATTTTTC TCTATGATCG CTTTACCTTC CAACGGGAAC AAATTACTAA AAATTGGTTA
GGAGAAGTCC GCCATCCAAC CATTAGCGGC AACGGTCGCT TAATTGCTTT TGAAGCCAAC
CGTCAGGGAC AATGGGATTT AGTCATTTAT GATCGCGGAT TAAATACCCC TTTGTCTGTT
CCCAACCCAC AGCAAAAGGA AACCGGAATC AACACAAACC CAAAAAACCA GTAG
 
Protein sequence
MKPRPKRFHQ SLTLLLLLSS LTLGLGSCQP GTFITPPTLE LGSALNSRSA EEFPRFSYDG 
RYLVFASDRQ GQRGIWLYDR LNNRLLPLPG INQPGTRQDQ PDISSDGRYI VYVSEQEGKP
DIFLYDRFTF QREQITKNWL GEVRHPTISG NGRLIAFEAN RQGQWDLVIY DRGLNTPLSV
PNPQQKETGI NTNPKNQ