| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4169 |
|---|
| Symbol | |
|---|
| ID | 8393520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 4302454 |
|---|
| End bp | 4303203 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644982084 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_003139796 |
|---|
| Protein GI | 257061908 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00060382 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATTA TCAGGCGTTG GTATGTTAAC TATGGCTCAA AATTGGTTTG GGCAGTGGTG
GCTTTAGCCA TTGGTTGGTT TTTGCGCCAA ACCCAAGGAG CCCCCCTGCT CGAATTATAT
TATTGGGTCA GTCGTCCGTT CCATTCGGCT CCACCGAGTC TTTTGGAAGA GCGATTGACT
AACGCCCGAA TTGTTGAACT AGAGCAGCGT TTAGCTGAAT TAGAACGGCA AAATCAGCAG
TTACAGAGAC TTCTGGGATA TTATCAACAA CAGCAAGCAG GGGTGATTAC GGCTCCGATT
ATTGGACGAA GTACCGATGA TTGGTGGAAA CAAGTGATTA TCGGGCGAGG CAGTCAAGAT
GGTATTAAAG TAGGTTATGT GGTGACGGGG ATTGGGGGTT TAATTGGTCG AGTCATCGAT
GTTACCCCGA ATACGAGCCG AGTTTTATTG GTTAGTGATC CCACCAGTCG TGTTGGGGCA
ACGGTGAGCC GTAGTCGAAC TATGGGGGTC GTTGAGGGGG AAAGTGCGCA GATAGCCGTG
ATGCGCTTTT TTGAAAAAGT CCCCCAAGTG CGTCCAGGGG ATACGATTAC CACGTCTCCG
GTGAGTCGTC TGTTTCCTGG GGGACTGCCC ATCGGTCAGG TAGAATCAGT CAATCTCGAA
AAGAGTCCAG CTCCAGAAGC GAAGATTCGA CTAACGGCTC CGATTAATGA TTTAGAGTGG
GCGATCGTCC ATCCCTTTGA AAGTCAATGA
|
|---|
| Protein sequence | MLIIRRWYVN YGSKLVWAVV ALAIGWFLRQ TQGAPLLELY YWVSRPFHSA PPSLLEERLT
NARIVELEQR LAELERQNQQ LQRLLGYYQQ QQAGVITAPI IGRSTDDWWK QVIIGRGSQD
GIKVGYVVTG IGGLIGRVID VTPNTSRVLL VSDPTSRVGA TVSRSRTMGV VEGESAQIAV
MRFFEKVPQV RPGDTITTSP VSRLFPGGLP IGQVESVNLE KSPAPEAKIR LTAPINDLEW
AIVHPFESQ
|
|---|
| |