Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_4143 |
Symbol | psaB |
ID | 8393494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4270703 |
End bp | 4272931 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644982058 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_003139770 |
Protein GI | 257061882 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00848687 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.293188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA AATTTCCAAA ATTTAGCCAG GATCTCGCCC AAGACCCGAC AACTCGTCGG ATTTGGTATG GTATTGCCAC CGCCCACGAC TTTGAAACCC ATGATGGCAT GACCGAGGAA AATCTTTACC AAAAGATTTT TGCCTCCCAT TTCGGACACA TCGCCATCAT CTTTCTGTGG ACTTCCGGCA CCCTCTTCCA TGTAGCCTGG CAAGGTAACT TCGAGCAGTG GATTACCGAT CCCCTAAACA TCCGCCCCAT CGCCCATGCG ATTTGGGACC CCCACTTTGG GCAAGGAGCG ATTGATGCCT TTACCCAAGC GGGTGCTTCT TCCCCAGTCA ATATTTCCTA CTCTGGGGTT TATCACTGGT TCTACACCAT TGGTATGAGA ACCAACGGCG ATCTCTATCA AGGGTCAATT TTCCTCTTGA TTCTGTCCTC GTTGTTCTTG TTTGCAGGTT GGTTACACCT ACAACCCAAG TTCCGTCCTA GCTTAGCTTG GTTCAAAAAT GCTGAATCTC GTCTAAACCA CCACTTGGCA GGTTTGTTCG GGGTTAGCTC TTTGGCCTGG ACTGGACACT TGGTACACGT CGCTATTCCT GAAGCTCGCG GACAGCACGT TGGTTGGGAT AACTTCCTGT CTACCCCTCC CCATCCGGCT GGCTTAGCAC CGTTCTTTAC CGGGAACTGG GGCGTTTACG CTCAAAATCC CGATACGGCA AGCCATGTCT TCGGAACTTC TCAGGGGGCA GGAACGGCGA TCTTAACCTT CTTAGGTGGC TTCCATCCTC AGACAGAAGC TCTGTGGTTG ACGGATATCG CCCATCACCA CTTGGCGATC GCAGTAATCT TCATTGTTGC TGGCCATATG TACCGCACTA ACTGGGGTAT TGGTCACAGC ATCAAAGAGA TCCTCAACGC CCACAACCCC CCTCAAGGGA CTCCCTTTGG TGGAGCGATC GGAGCAGGAC ACAAAGGACT CTACGACACC GTTAACAATT CTTTACACTT CCAACTCGGT TTAGCGTTGG CTTGTTTAGG GGTTGTTACC TCCTTGGTGG CGCAACATAT GTATTCCTTG CCCTCCTACG CCTTCATCGC TAAGGACTAC ACCACCCAAG CAGCCCTCTA TACCCATCAC CAGTACATCG CTGGATTCTT GATGGTAGGA GCCTTTGCCC ACGGTGCGAT CTTCTTCGTT CGTGACTACG ATCCTGAAGC TAACAAAGAT AATGTGTTAG CTCGGATGCT CGAACACAAA GAAGCCATCA TTTCTCACTT AAGTTGGGTT TCTCTCTTCT TAGGTTTCCA CACCTTAGGC CTCTACGTTC ACAACGATGT CGTGGTTGCC TTTGGAACCC CTGAAAAGCA AATCCTGATC GAGCCTGTGT TTGCTCAATG GATTCAAGCG GCTCATGGTA AAGCCCTCTA CGGATTTGAT GTGTTATTGT CCAATCCTGA CAGTGTGGCT TCTACCGCTT ATCCTAACTA CGCCAACGTT TGGTTACCTG GCTGGTTAGA TGCGATTAAC AGTGGTGCTA ACTCCTTGTT CTTAACCATT GGACCTGGAG ACTTTTTAGT TCACCATGCG ATCGCTCTAG GATTACACAC CACCACCTTA ATCCTCGTTA AAGGTGCTCT CGATGCACGC GGATCTAAGC TAATGCCCGA TAAAAAGGAC TTTGGCTATT CCTTCCCTTG CGATGGACCT GGACGCGGCG GTACTTGTGA TATCTCTGCT TGGGATGCTT TCTACCTCGC TATGTTCTGG ATGTTGAACA CCCTAGGGTG GTTAACCTTC TACTGGCACT GGAAGCATTT AGGCATCTGG AGTGGTAACG TTGCTCAATT CAACGAAAAC TCTACCTACC TAATGGGTTG GTTCCGTGAC TATCTCTGGG CGAACTCTGC TCAGTTGATT AACGGGTATA ACCCCTACGG TGTTAACAAC CTGTCGGTTT GGGCTTGGAT GTTCCTCTTC GGACACCTGG TTTGGGCGAC TGGTTTTATG TTCCTCATCT CTTGGCGGGG TTACTGGCAA GAGTTGATCG AAACGATTGT TTGGGCTCAC GAGCGTACTC CTCTGGCGAA CCTAGTTCGT TGGAAAGATA AGCCCGTTGC TCTTTCTATC GTTCAAGCTC GTTTAGTTGG GTTAGCTCAC TTTACCGTGG GTTACATTCT GACTTACGCA GCATTCCTCA TTGCTTCAAC GGCTGGTAAG TTCGGTTAA
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Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FETHDGMTEE NLYQKIFASH FGHIAIIFLW TSGTLFHVAW QGNFEQWITD PLNIRPIAHA IWDPHFGQGA IDAFTQAGAS SPVNISYSGV YHWFYTIGMR TNGDLYQGSI FLLILSSLFL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA GLFGVSSLAW TGHLVHVAIP EARGQHVGWD NFLSTPPHPA GLAPFFTGNW GVYAQNPDTA SHVFGTSQGA GTAILTFLGG FHPQTEALWL TDIAHHHLAI AVIFIVAGHM YRTNWGIGHS IKEILNAHNP PQGTPFGGAI GAGHKGLYDT VNNSLHFQLG LALACLGVVT SLVAQHMYSL PSYAFIAKDY TTQAALYTHH QYIAGFLMVG AFAHGAIFFV RDYDPEANKD NVLARMLEHK EAIISHLSWV SLFLGFHTLG LYVHNDVVVA FGTPEKQILI EPVFAQWIQA AHGKALYGFD VLLSNPDSVA STAYPNYANV WLPGWLDAIN SGANSLFLTI GPGDFLVHHA IALGLHTTTL ILVKGALDAR GSKLMPDKKD FGYSFPCDGP GRGGTCDISA WDAFYLAMFW MLNTLGWLTF YWHWKHLGIW SGNVAQFNEN STYLMGWFRD YLWANSAQLI NGYNPYGVNN LSVWAWMFLF GHLVWATGFM FLISWRGYWQ ELIETIVWAH ERTPLANLVR WKDKPVALSI VQARLVGLAH FTVGYILTYA AFLIASTAGK FG
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