| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4010 |
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| Symbol | def |
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| ID | 8393360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 4126111 |
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| End bp | 4126674 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644981930 |
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| Product | peptide deformylase |
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| Protein accession | YP_003139644 |
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| Protein GI | 257061756 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.132582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCTG TAATTGCTGT AGAAAAAGAA AAACTCGAAA ATCCTCCTTT AGAAATTCAC
TTTCTGGGCG ATCGCGTCCT CCGTCAACCC GCTAAACGCA TCGCTAAAGT TGATGATACT
ATTCGTCAAC TGGCCAAGGA AATGCTCCAA ACGATGTACA GTTCTAACGG GATCGGGTTA
GCTGCTCCCC AAGTTGGCGT ACATAAGCAA TTAATCGTCG TAGACTGTGA TCCCAATGAT
CCCGCTAATC AGCCAATTAT CTTGATTAAT CCCCAAATTA CTCGGTTTTC TCAAGAATTA
TGCGTTGTTG AAGAAGGATG TCTCAGTATT CCAGGGGTTT ATTTAGACGT AACTCGTCCT
AAAGCGATCG AAGTCAGTTT TAGAGATGAA CAAGGAAAAC CTCGCAAACT CCAGGCCACA
GACTTATTAG CGCGAGTCAT TCAACATGAG ATGGATCACC TCAATGGGGT CATGTTTGTC
GATCGCGTCA ATAATGGGTT AGCCTTAACG GAATCCCTGC AAAAAAATGG CTTTTCGGTA
CAAGCCGTTA AACCCGTCAA GTAA
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| Protein sequence | MTAVIAVEKE KLENPPLEIH FLGDRVLRQP AKRIAKVDDT IRQLAKEMLQ TMYSSNGIGL
AAPQVGVHKQ LIVVDCDPND PANQPIILIN PQITRFSQEL CVVEEGCLSI PGVYLDVTRP
KAIEVSFRDE QGKPRKLQAT DLLARVIQHE MDHLNGVMFV DRVNNGLALT ESLQKNGFSV
QAVKPVK
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