| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3980 |
|---|
| Symbol | |
|---|
| ID | 8393330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 4094525 |
|---|
| End bp | 4095523 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644981904 |
|---|
| Product | phosphoribulokinase |
|---|
| Protein accession | YP_003139618 |
|---|
| Protein GI | 257061730 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0572] Uridine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000234967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00010781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG AGCTAGACCG CGTGGTTCTT ATTGGGGTAG CCGGAGATTC CGGTTGCGGA
AAATCAACTT TTTTACGTCG TTTAATTGAT TTATTTGGCG AAGAATTTAT GACGGTTATC
TGTTTAGATG ACTACCATAG TCTTGATCGC CAAGGGAGAA AACAAGCTGG AGTCACGGCT
TTAGACCCCA AAGCCAACAA TTTTGACCTA ATGTATGAGC AAGTTAAAGC CCTCAAATCA
GGTCAAGCCA TTGATAAACC TATTTATAAT CATGAAACGG GGATGATTGA TCCCCCCGAA
CGAATTGAAC CGAATAAGGT AATTGTCATT GAAGGGTTAC ATCCTCTCTA TGATGAACGG
GTTCGTAGTT TAGTCGATTT CAGTGTTTAC CTTGATATTA GCGACGAAGT TAAAATCAAC
TGGAAAATCC AACGGGATAT GGCTGAACGG GGTCACACCT ACGAAGACGT TTTAGCCTCT
ATTAACGCCA GAAAACCTGA TTTTCAAGCC TATATTGAAC CCCAAAAGCA ACACGCTGAT
GTTGTCATTC AAGTCTTACC CACCCAATTA GTCGACGATA AGCAAAGCAA GCTCTTACGG
GTACGCTTAG TTCAAAAAGA AGGAATCACT TACTTTGAAC CAGCCTATCT GTTTGATGAA
GGGTCTACCA TTGATTGGCG GCCTTGTGGT CGGAAGCTAA CCTGCGCCTA TCCGGGGATT
AAAATGTACT ACGGTCCCGA CAACTTTATG GGCAATGAAG TCTCTATATT AGAAGTCGAT
GGTCAATTCG ACAATCTCGA AGAGATGATT TACATTGAAA GTCATCTAAG CAAAACTGGA
ACCAAATATT ATGGTGAGAT GACCGAATTG TTGCTACAAC ACAAAGATTA TCCAGGGTCT
AATAACGGAA CCGGACTTTT CCAAGTCTTA GTCGGTCTCA AAATGAGAGA AACCTATGAA
AAAATAACAG CTACCACTAA AGTCGCTGTT CCTGCATAA
|
|---|
| Protein sequence | MTTELDRVVL IGVAGDSGCG KSTFLRRLID LFGEEFMTVI CLDDYHSLDR QGRKQAGVTA
LDPKANNFDL MYEQVKALKS GQAIDKPIYN HETGMIDPPE RIEPNKVIVI EGLHPLYDER
VRSLVDFSVY LDISDEVKIN WKIQRDMAER GHTYEDVLAS INARKPDFQA YIEPQKQHAD
VVIQVLPTQL VDDKQSKLLR VRLVQKEGIT YFEPAYLFDE GSTIDWRPCG RKLTCAYPGI
KMYYGPDNFM GNEVSILEVD GQFDNLEEMI YIESHLSKTG TKYYGEMTEL LLQHKDYPGS
NNGTGLFQVL VGLKMRETYE KITATTKVAV PA
|
|---|
| |