Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3977 |
Symbol | |
ID | 8393327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4091177 |
End bp | 4091806 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644981901 |
Product | NmrA family protein |
Protein accession | YP_003139615 |
Protein GI | 257061727 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000385201 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAGCAT TGGTAGCAGG AGCGACGGGA GAAACGGGTC GCAGAATTGT TCAAGAATTG GTTAAGCGTC AGATTGAGGT CCGCGCTTTA GTCCGAGACC TAGAAACCGC TAAGACTGTT TTACCTCCAG AAGCTGAGTT AGTGGTGGGA GATGTTCTTA AACTCGATAG TTTAAAGCAA GCCATAACCG ATTGTACAGT CCTACTCTGT GCTACAGGTG CTAGACCGAG CCTCGATCCC ACAGGACCCT ATCAGGTAGA CTATCAAGGG ACAAAAAATC TGGTGGACGT GGCTAAAGCT AAAGACATTC AACAGTTTGT CTTGGTTTCT TCCCTTTGTG TTTCTCAGTT TTTTCACCCG TTGAACTTAT TTTGGTTGGT TTTATATTGG AAAAAACAGG CCGAAACCTA TCTCCAAAAT AGCGGTTTAA CCTATACTAT CGTCCGTCCT GGTGGTCTTA AAAACGAGAA TAACTCAAAT CCTATTGTGA TGTCATCCGC AGATACGCTG TTTGAAGGGA CGATTCCTCG GCAAAAAGTG GCTGAGGTTT GCGTAGATTC ACTATCTAAT CGTGATTATT TTAATACAAT TGTTGAAGTG GTGACTAAAT CGGAGGCTGT TTCTGTTTAA
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Protein sequence | MKALVAGATG ETGRRIVQEL VKRQIEVRAL VRDLETAKTV LPPEAELVVG DVLKLDSLKQ AITDCTVLLC ATGARPSLDP TGPYQVDYQG TKNLVDVAKA KDIQQFVLVS SLCVSQFFHP LNLFWLVLYW KKQAETYLQN SGLTYTIVRP GGLKNENNSN PIVMSSADTL FEGTIPRQKV AEVCVDSLSN RDYFNTIVEV VTKSEAVSV
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