Gene Cyan8802_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3949 
Symbol 
ID8393299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp4070365 
End bp4071498 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content43% 
IMG OID644981874 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003139588 
Protein GI257061700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00752056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGAAC AAGCGATTAA ACCCTTTTAT TTTGATATTA CTGATGAGGA AATTGACGAT 
TTTGCGGAAC AATCCAAAAA GATTCTCAAA TCGGGTAGAC TAATTTTAGG AGAGAATACC
GCCGCCTTCG AGAAAGCCTT TGCCGACTAT GTAGGGACAA AACACGCGAT CGCCGTCAAC
ACAGGTTCAT CCGGACTAGA AATCATTTTA CGCCTCAAAA ACGCCCAAGG AACCACCGTT
TTAGTCCCCA CCAATACCAA TTTTGCCACC GTTGCTGCTG TTCTACGAGT CGGGGCACAG
GTTCAATACC TAGACATGGA CGAAACCACC TTTGCTCCCT CTTTAGCCAT GGTACTCGAA
GCCGTAGAAA AAGGAGCCAC TCCTGCCATT TCTGGGGTAC TGTGGGTCCA CATTGGCGGA
GTCATCTCTC CCGAATTTCC CCAAGTGGTA GACTATTGCC ATCAAAACGG CTTATTTGTC
CTTGAAGATA CTGCCCACGC CCACGGAAGT CAAATTAAGG GTATACAAGC CGGAAATCTA
GGGGATGGGG CAGCGTTTTC TTTCTTTCCC ACTAAAGTGA TGACCACCTT TGAAGGAGGG
ATGATCACCC TTAACGACGA TGAAGAGGAT TATATCGCGC GATCGCTGAG AAATCAAGGC
AAACGAGGGA TGGACTTTGG GGGGTTACAC ACCGACTTTG GCAATAGTAC CCGCATGACA
GAAATTCACG CCGTTTTAGG ATTAATTCAG TTAGCAAAAT TGCCTAAAAT GTTAGAGAAA
CGCCAAAAAT ATTATCAATT AATTACCCAA TTTTTACGCG AAGCCGGACT CAATTTTGTC
TCAACAGATC ACATGGATCA AGCGAGTCAA TATAAATTAA TTGTTCATGT TTCTTCTGGA
AAAAACCCTC AAGAAATTAA GGCAAAATTA GCAGAAGAAA ACATCTTTTT AGGGGGTACA
GTTTACGAAA TTCCCTGTCA TTTACAACCT GTTTTTAAAG GGATTGGAGA AGGACAAAAA
TTGCCTCGCG CTGAATATTG GTGTCCTAAT CATATTTGTC CCCCGCTAAC ATCAGGAATG
ACCGAAGAAG AAGCTATAAT GGTAGGAAAA GCCTTAGTTA AACACCTTTT GTAA
 
Protein sequence
MAEQAIKPFY FDITDEEIDD FAEQSKKILK SGRLILGENT AAFEKAFADY VGTKHAIAVN 
TGSSGLEIIL RLKNAQGTTV LVPTNTNFAT VAAVLRVGAQ VQYLDMDETT FAPSLAMVLE
AVEKGATPAI SGVLWVHIGG VISPEFPQVV DYCHQNGLFV LEDTAHAHGS QIKGIQAGNL
GDGAAFSFFP TKVMTTFEGG MITLNDDEED YIARSLRNQG KRGMDFGGLH TDFGNSTRMT
EIHAVLGLIQ LAKLPKMLEK RQKYYQLITQ FLREAGLNFV STDHMDQASQ YKLIVHVSSG
KNPQEIKAKL AEENIFLGGT VYEIPCHLQP VFKGIGEGQK LPRAEYWCPN HICPPLTSGM
TEEEAIMVGK ALVKHLL