Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3940 |
Symbol | |
ID | 8393290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4059422 |
End bp | 4060240 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644981865 |
Product | ABC-3 protein |
Protein accession | YP_003139579 |
Protein GI | 257061691 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0593953 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAAA CGATTTTTAG CTCATTACAG TTTGAATTTA TGCGAAATGC CCTATTAGCA GGGATATTAG TCAGTATTGC TTGTGGAATT GTGGGGACAT TGGTGGTCGT TAATCGAATC GTTTTTATTA GTGGGGGTAT TGCCCATGCT GCCTATGGAG GGATTGGATT AGGCTATTTT TATCGTTTTA ACCCCGTTTT AGGGGCGATT CTTTTTGCGT TAATTGCTGC TTTGGGAATG GGATGGGTGG CTCGTAAAAC CCAACAACGG GCTGATACTA TTATTGGGGT AATGTGGGCA GTGGGAATGG CGATTGGGAT TATTTTTGTT GATTTAACTC CGGGTTACAA AGCGGATTTA ATGAGTTATT TATTTGGCAG TATTTTAACG GTTTCTCAGG AAAATCTCTT GATTATGTCA GCCTTAGATG TCATGATTAT TATCAGTGTT TTCCTGTTTT ATAAAGAATT ATTAGCCATT TCTTTTGATC CCATTTTTGC CTTTACCCGT AATGTTCCAG TCGATTCTCT TTACCTCATG TTAGTCACCA TGATTGGTTT AACTGTGGTT ATGGTGATGC AAGTTGTAGG ATTAATTATG GTGATTGCTT TGTTAACCAT TCCAGCCGCT ATTGCCGGAC AATTTTGGCA AGATCTCAAA CAAATTATGA TTGTGGCTAT GATTTTGGGA GGAATTTTTA CGACGCTAGG ACTAGGGTTA TCCTATGCTT TTAATTTAAC ATCGGGAGCG ACAGTTATTT TAATTTCTGG TGCAGGATAT TTACTAAGTT TAATGATTAA AAAATTAGGG GTAAACTAA
|
Protein sequence | MIETIFSSLQ FEFMRNALLA GILVSIACGI VGTLVVVNRI VFISGGIAHA AYGGIGLGYF YRFNPVLGAI LFALIAALGM GWVARKTQQR ADTIIGVMWA VGMAIGIIFV DLTPGYKADL MSYLFGSILT VSQENLLIMS ALDVMIIISV FLFYKELLAI SFDPIFAFTR NVPVDSLYLM LVTMIGLTVV MVMQVVGLIM VIALLTIPAA IAGQFWQDLK QIMIVAMILG GIFTTLGLGL SYAFNLTSGA TVILISGAGY LLSLMIKKLG VN
|
| |