| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3933 |
|---|
| Symbol | |
|---|
| ID | 8393283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 4048486 |
|---|
| End bp | 4052994 |
|---|
| Gene Length | 4509 bp |
|---|
| Protein Length | 1502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644981858 |
|---|
| Product | PKD domain containing protein |
|---|
| Protein accession | YP_003139572 |
|---|
| Protein GI | 257061684 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.114839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.527223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTACGAA ATATGGAAAT GACCCCATCT TCAGATGTTT CTCATGACTC ATTTCTCAGT
ATTGTTCCTG ATGAAAATGT AACCCATGCT GCTATTAATA ATGGCTCTTG GTTTGATGTT
AATACTTGGC AGAATGGATC GATTCCTAGT GATAATGCGA ATGTGCTTAT CTCAGAAGGA
GTAGAAGTTC TCTACGATCA AGAAAGTGAT GCTCGTTTAA AAACTGTCCG AATCGATGGC
ACTCTCAGCT TTGCCCAAGA TCAAAACACG AAAATGGTGG TAGATTTTAT CGGTGTTACT
GATACAGGAA CCCTAGCAAT TGGCACCGAA ACAAATCCGA TTCAAGATAG TCAACAAGCG
CAAATTATTT TTGCTCCCGT CGATCCCAAT AATGGAGCGA TCGATTTAGA ATGGGACCCG
AATCAATTCA GTCGAGGATT AATTGCCGAT CACGGAGCTT CAGTGAGTAT TGTGGGATCT
GAAAAAACCT CCTATGTGAC CTTGGCAGGA GATCAACTCG CTGGTTCAAC CCAACTGGTC
TTTTCTGAAC CCGTTCCCAG TGATTGGAAA GTGGGCGATC AGATAGTCTT AACGGGTACT
CAATGGAATA ACAAAGGTTC CCATGCAGAC AATAGCAAAA GTCAAGATGA AGTTTTAACC
ATTGAATCGA TTAATGGCAA TACAATTACT TTTAAACATA ATGATGTTAA TGGAAACGCT
TTAAGATTTG ATCATACGGC ACCAGAAGGC TTTGATCTGG ATATTTATGT TGCTAATTTA
ACTCGTAACG TTAGTTTGAC AACCGAAGGA GGAGATGAAA CTCCTATTTC CGAACGGGGT
CATACGATGT TTATGGATCA CGATACAGTT ATTGAAAATA CAAGTTTTTA TGATTTAGGA
AGAACTAATA AAGATATCGT TCTCAATAAT CCTGAATTTG ATAGTAATGG AAATTTAATC
CCAGGAACCG GAACTAATGT CCAAGGACGT TATCCTATCC ATATCCATGA AGTTTTTGAA
CACGATCCTA ACGATCTTGG GGCGGCTGAA ATTAACGGTA ATGCCATTTG GGGGAGTCCA
GGGTGGGGCG TTTCCATTCA TAGCAGTCGA GCCACTGTAG AAGATAACGT CTCTTTTGAT
GTCTTAGGAG CTCACTACGT CACGGAACAC GGAGATGAAC AAGTCGCATT CATAGGCAAT
ATTGCGATTA AATCACCAGG TGCTCAGACA GATCCACCTG CTGACTTACT TCAACCAACC
GATGAGAGAG GCGTACTGAA AGATTTTGGC ACAGAAGGAA TGGGGTTTTG GTTGGGAACG
TCTTACTCAG CGACTGCCTT TGAAAATAAC ATTGTCACAG GAACCGAAGA TTCTGGAATT
TTTGTCTACG GACATAACGA TGTATTGGCT CAACCGAAAG TATCTGTTGA TACGCTACCG
ACTGAACTTC AAGATATTGC TGGCAATGCT ACCACCATTG ATTCTTGGAA GGTTCCCGTT
CAAAACTTCA GCGATAATAC TGTTTATAAT GCCGATGCTG GAATAGAAAT TCGCGGAGTC
ACTCGTGATG ATAATGGCTT TGATATGTTT GGCATTAAAC ATGATGAACA GAGTGTATTT
GAAGGATTTG ACATTTGGGG AGTTCGTGAG GATGGGATTC AAATTTCTTA CTCTTCTAAT
ATTACTATTA AAGATTCTTT AATTATTGGT GATCCTGACT CACCAATTTT ACGCGGCGGT
GCTGCCATTT CTAGTCCAAG AGGAGTGGGA ATTTATAGTG ATAAAAATGC TCGTGACATT
ATTTATGATA ATGTTCATGT AGAAGGGTTT GAATTTGGCG TAATGATTCC ACAAACCAAT
GGACAAGGCT ATCATGATGA GTCGTCATTT AGTAGTAGTC AATTAATTGG TGGTACTTTT
GCCAACAATA TCTATAATCT TGCTCCGGCA TCGGGTCGTG TTGGTAATTC TCCAAGTAAT
ACCTCACTCT CTCCAGGAAC AGATAGAGCC CCAATAACCC CTTATTTTGA AATTATAGGT
AATCCAATTT TTGAAGTTCC TACTAATGAT AAAGCTCCCG TTGCTCAGTT TAAAACTACC
TCTCAAGGAG GCTTAGCTCT TCAATTTGAT GCCAGTCAAT CTTTTGATCC AGATTATAGT
TTAACTTGGT CTGATACCAA AAATAATCCA AATACTGCTG GTAATAATAC GATCGCTTCC
TTTGCTTGGG ACTTCGACAA TGATGGAGAA ATTGATGATT TTGGTCGTTA TGCAACTCAT
GTGTACGACA CACCAGGAAC TTATTCTGTA ACACTTGAAG TAACTGACAT TCAAGGCAAT
ACAACAACAA CAACTCAGAA CATCACTGTT AGCTATCAAC CCTTTGAAAA CATCGTCATG
GGTAGCAATT TTAGCGGAAC AGATGCCACT TTTAAGAGCA ATTCTGGAAG CACTCAGTGG
TATAGCTCAG GTTGGTATGT GCCAGGGAAT TCTCGCTGGA ATCAAGACAC CGTTAATGGC
TGGACTTATG CTGATGATAG TGGTGCTGAT GGACTCACTC AAATTATTTA CAATCAAGGT
GTTAATCAAG GATTTCAAAC AATTAGTTTT GATGCTACAA ACTTAGGTTC AGCTAATACT
TTGCAATTAC AAGTATTTGG AGTTAATGGA GAATTCACCT TCAGTAACCG AGGTACCGGT
TCTCCACAAA GTAGTAGCAA TACTGTTCCC TTTGAATCAG TCCAGCTTTT AGATACGGGG
AATATTGCTA CTAACGAGTT TGATTGGAAA ACCTTTACCT GGGAAAATAT TGATTTTGGG
GCAGGATATG ATTTTATTGC CTTGAGATTT AGAACCGGTG GAGTCACTTC AACTGAGTTT
CAAGCCATCG ATAATGTTTT TATTGGTAAC TTATCTACAT CCTCTGAAAC TCAAAATACT
TCTCCCCTAG CGACCAATGA TATCGCAACA ACTGTAGTGA ATACTCCTGT TGTGATTAAT
GTCTTGGCTA ACGATAGTGA TATTGATGGG GATTTCTTAT CTATTAGTAA TTTTACCCAA
GGAACTAATG GAACAGTTAC TAATAATAAC AATGGCACTT TAACCTTTAC TCCTAAAGCC
AATTTTTCTG GAACCGATAG CTTTTCCTAT ACGATTAATG ATGGCATGGG AAGAACAAGT
ACGGCTCAGG TTAACTTAAC TATTAATTCT GCTTCCAACA ATGCACCCGT GGCTAATAAT
GACTTAGCAA CGACTTTAAC TAATACATCT ACAGTGATTA ATGTCTTAGC GAACGATAGT
GATGTTAATG GGGATGTATT ATCGATTAGT AGTTTGACTC AAGGAACGAA TGGGACGGTA
ACAAATAACA ATAATGGAAC TCTAACTTTT ACTCCTAAAA CTAACTTCTC TGGAACCGAT
AGCTTTTCCT ATACAATTAA TGATGGCAAA GGAGGTACTG CTACCGCAAG CGTACAAGTT
ACTGTTTCCG CACCCAATAA CACCGGGGGA AATATTATCC ATGATGGCAC TTTTAGTGCT
AATAATGGCA CTGATTTTAG TCAAAATACA GGAACGACTA CCTCGAATGA TACCAATAAA
GGTTGGATTC GTCCTAAGTC TCAAAAATGG AATAAAGACA GTGTTAGCGA ACAAGCAGTC
GCTGATAATG ATGGTGCATC AGGATTAACT CAAGTTATTG CCAGTAATAA CACAACCAAA
GGGTTACAAA CGATTAGCTT TGATGCCAAA AATTCAGGGT CAGGAAATAC ACTACGTCTA
CAAGTCTATG GGATTGACGG TCAGTTTAAC ATGAGTAATT GGGATACTAA AACTCCCGTT
AGTGCTGGAA CTGACCCCAT CAGTGTTACT ACCCTTCTTG ATACAGGAAA TGTCGCTACC
AGTTCCTTTG ATTGGAAAAC ATTGACTTGG AATGGGATTG ACTTTAGCAA TGGATACCAA
TACATTGCTG TTCGTTTGAC CACAGGGGAT GTTACTTCTA CTGAATTTCA AGCCATTGAT
AATGTTTTTA TTGGTGCTTC AACCTCAACC AATACGGCTG CTCTATCCCC TCAAACAACA
ACAACTGTTC CAACTTCTGA CAATTCCTTA ACCCAAATGA CTACTCTCGC GGGAACGTCA
GCCGATGATC TCATGAATGG AACCTCTGGC AACGATATCT TAACGGGTAA CTCAGGCAAT
GACACTTTAA TCGGCAATGC AGGTAATGAT GTTATCACCG GCAGCACGGG AAATGATCTA
CTGTTTGGTG GTTCAGGAGC AGATACTTTT AATTATCAGC TTGGGGATGG ACAAGATACT
ATCGACGATT TTGAGACAGG CGATAAACTA CGTTTGACGA ATATCGACCC CACTTCAGTC
CAATTGATGG GACAAGGTAC TGGTACTTTT ATTGATCTTG GTAATAATCA AGGAATCGTT
CTTCGAGACA TTTTACCGGC TCAACTCAAT GTTAATCTTT TACCAGACGT TTTAGAACTT
GTGTTGTAA
|
|---|
| Protein sequence | MVRNMEMTPS SDVSHDSFLS IVPDENVTHA AINNGSWFDV NTWQNGSIPS DNANVLISEG
VEVLYDQESD ARLKTVRIDG TLSFAQDQNT KMVVDFIGVT DTGTLAIGTE TNPIQDSQQA
QIIFAPVDPN NGAIDLEWDP NQFSRGLIAD HGASVSIVGS EKTSYVTLAG DQLAGSTQLV
FSEPVPSDWK VGDQIVLTGT QWNNKGSHAD NSKSQDEVLT IESINGNTIT FKHNDVNGNA
LRFDHTAPEG FDLDIYVANL TRNVSLTTEG GDETPISERG HTMFMDHDTV IENTSFYDLG
RTNKDIVLNN PEFDSNGNLI PGTGTNVQGR YPIHIHEVFE HDPNDLGAAE INGNAIWGSP
GWGVSIHSSR ATVEDNVSFD VLGAHYVTEH GDEQVAFIGN IAIKSPGAQT DPPADLLQPT
DERGVLKDFG TEGMGFWLGT SYSATAFENN IVTGTEDSGI FVYGHNDVLA QPKVSVDTLP
TELQDIAGNA TTIDSWKVPV QNFSDNTVYN ADAGIEIRGV TRDDNGFDMF GIKHDEQSVF
EGFDIWGVRE DGIQISYSSN ITIKDSLIIG DPDSPILRGG AAISSPRGVG IYSDKNARDI
IYDNVHVEGF EFGVMIPQTN GQGYHDESSF SSSQLIGGTF ANNIYNLAPA SGRVGNSPSN
TSLSPGTDRA PITPYFEIIG NPIFEVPTND KAPVAQFKTT SQGGLALQFD ASQSFDPDYS
LTWSDTKNNP NTAGNNTIAS FAWDFDNDGE IDDFGRYATH VYDTPGTYSV TLEVTDIQGN
TTTTTQNITV SYQPFENIVM GSNFSGTDAT FKSNSGSTQW YSSGWYVPGN SRWNQDTVNG
WTYADDSGAD GLTQIIYNQG VNQGFQTISF DATNLGSANT LQLQVFGVNG EFTFSNRGTG
SPQSSSNTVP FESVQLLDTG NIATNEFDWK TFTWENIDFG AGYDFIALRF RTGGVTSTEF
QAIDNVFIGN LSTSSETQNT SPLATNDIAT TVVNTPVVIN VLANDSDIDG DFLSISNFTQ
GTNGTVTNNN NGTLTFTPKA NFSGTDSFSY TINDGMGRTS TAQVNLTINS ASNNAPVANN
DLATTLTNTS TVINVLANDS DVNGDVLSIS SLTQGTNGTV TNNNNGTLTF TPKTNFSGTD
SFSYTINDGK GGTATASVQV TVSAPNNTGG NIIHDGTFSA NNGTDFSQNT GTTTSNDTNK
GWIRPKSQKW NKDSVSEQAV ADNDGASGLT QVIASNNTTK GLQTISFDAK NSGSGNTLRL
QVYGIDGQFN MSNWDTKTPV SAGTDPISVT TLLDTGNVAT SSFDWKTLTW NGIDFSNGYQ
YIAVRLTTGD VTSTEFQAID NVFIGASTST NTAALSPQTT TTVPTSDNSL TQMTTLAGTS
ADDLMNGTSG NDILTGNSGN DTLIGNAGND VITGSTGNDL LFGGSGADTF NYQLGDGQDT
IDDFETGDKL RLTNIDPTSV QLMGQGTGTF IDLGNNQGIV LRDILPAQLN VNLLPDVLEL
VL
|
|---|
| |