Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3932 |
Symbol | |
ID | 8393282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4047027 |
End bp | 4047878 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644981857 |
Product | ABC-2 type transporter |
Protein accession | YP_003139571 |
Protein GI | 257061683 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.182483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.385044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGACAAA GCTTGATTAA ACATACTCCA GAAAGCCAAT TACGCCATCC TAGGCAGTTG TTTAAGCAGA TGTTAGTAGA CTTACTGGCA TCTCGTGAAC TTGCCTGGCA ATTATTAATA CGAGATCTTA GGGCTCAATA TCGTCAGTCC CTCTTAGGGT TTGCTTGGGC ATTTTTACCT CCAATTGTTA CAGCAGCCGG AATGGTGATG GCTAAACAAT CCCAAGTGAT TAGTATTGGC GCAACCGATT TACCCTATCC CGCTTATGTC ATGTTTAGTA TGGCGTTATG GCAGACGTTT GTGGAGTCTT TAAATGGCCC TGTTATTGCC GTTACTCAAG CTAAGCAAAT GCTTGCTAAA ATCAATTTTC CCCGTGAAGC GATTATTATT TCTCAAATTG GCCAAGTTTT TTTTAACTTT AGTATTAAAC TAATCCTGAT TATTGGTTTA TTTATTTGGT TTAGAATCCC TATAACACCA AGTATTATTG TCGCTCCTGT TGCTTTAATT CATTTGATTT TTTTAGGAAC TGCTATTGGT TTATTAATTG CCCCTTTTGG TGCACTATAT CAAGATTTAT CGAAAGGACT AACCTTAGCG ACAGGGTTTT GGTTATTTTT AACCCCTGTC ATTTTCCCAG TACCGAGTCG AGAGGGTTTA TTTGAAACAT TAGTTAATCT CAATCCTGTT ACTCCTTTAT TAGTAACAAC TAGAGAATTG GCAACAACTG GAAACATATC TAATCCTCAA GGGTTTTGGA TAGCGAGTGG GCTGGCTATA ATAGGGTTGT TGATTGTTTG GGTTGTCTAT CGTGTTTCCA TGCCTTTTGT GATTGAGAGG ATGAGTGCTT AA
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Protein sequence | MGQSLIKHTP ESQLRHPRQL FKQMLVDLLA SRELAWQLLI RDLRAQYRQS LLGFAWAFLP PIVTAAGMVM AKQSQVISIG ATDLPYPAYV MFSMALWQTF VESLNGPVIA VTQAKQMLAK INFPREAIII SQIGQVFFNF SIKLILIIGL FIWFRIPITP SIIVAPVALI HLIFLGTAIG LLIAPFGALY QDLSKGLTLA TGFWLFLTPV IFPVPSREGL FETLVNLNPV TPLLVTTREL ATTGNISNPQ GFWIASGLAI IGLLIVWVVY RVSMPFVIER MSA
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