Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3902 |
Symbol | |
ID | 8393252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 4013248 |
End bp | 4015737 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644981827 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_003139541 |
Protein GI | 257061653 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.12168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.150325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAG AAAAATTAGA TTATCTTTTT CTATTGCTCG CACATATCCT ATGTGCTGAT CAACAAATTC ACTTGAAAGA AAATCAAGCA TTACATGAAC TAGCTACTCA AGCTAATATA GGACAAAGGA CTCTTGATGA AATGAATAAA ATTCTTGATC AAGAGGAAAA TCATCTTAAG ATAAAAACTG TAGCCCAAAG AATACCTCTT GGTCAACAAA ATGAAGCCAT AAGACAAGTT TTGGCACTCG CTTATCTTGA CGGTTTCTTT TCTCCTCTGG AAAAAGAGAT GATTGAGGAA ATTGTCAAAA TTTGGAACTG GCCACAGAAT TATTTAGTGC ATATTTTAGA AGAAGCAGAG AGCTTTTATC CTCAATCGAA GGATAACAAC GATAATCAAG AAGAATTGTC TTTTGCAGCC CGTTTTCTAA AAAATCAATA TACATCTGTA TTTTCTCGTT CTTTTATCCC AATAGCAAGA AAACTTGCAC CAGAAACAAT TGGACGGACT ATTGAGAGAA TAGAGAGAGA AATTTTATTA TCTGGACCCG AATATGATGA AGCTATTCAA CAATGTGCCA AAATTGCTCA AGAAGATTAT AAATATGCAA AAATAGCCCT CAACAGAACT TCCGATACAT TAAAAAAATT AGAAGAAAAC TTATCAAATA CGATAGAAAA CTTATCAAAT AAAACCACCA GTAAAGGTCA AGCAAATACA GCTAAAGAAG TAGCAAAACA ACTTAATGCT AGTCAAACAG CTTTAGGAGA AGAAATTGTT AAAGAATTAG AAAATGTTAA CAATACCTTT AAATCAAAAC AAAGGGCTTT AAGTCATTTT AGCATCGCTT TTATGGGAAA AACTAAAGCA GGTAAGAGTA CACTTCATGC GATTCTTACT AATGAAGGTT GGAATGCTAT AGGAGTTGGG AAACAAAGAA CAACCAGACA AAACCGTGTT TATGAATGGA AAAATATTAG AATTATTGAT ACTCCCGGCA TTGGTGCACC TGGTGGAAAA ACAGATGAAG AAATTGCTCA AAGTGTCATC GATCAATGCG ATATTATTTG TTATGTTGTT ACTAATGATA GTATCCAAGA AACTGAATTT GGGTTTATGA AACTTCTGAA AGAAAAAGCT AAACCTTTAA TTATTCTGTT GAATATTAAA CACAACTTAC GAGATCCCCG AAGATTAGAA CATTTTTTGA ACAATTCTGA AAAGTTTTTC TCCAAGACGG GGCAAAGTGG ATTAAAAGGG CATTTTGATA GAATTTATCG CTATGCTAAA GAACATTATA ATAACGATTA TTTTCCAATT ATTCCTGTTA TGTTACTTGC GGCTCAAATG TCACTTGAAC CAGAACACAA ACTAATTAAA TCTCAATTAT TTAAAGTAAG TAAGCTTCAA GATTTTCTTG ATTCGATTAG AGAATCATTA ATTAAACATG GAACAATTAG AAGATCCCAA ACCTTATTAG GTTCAACAGT AGGAGAAATT GTTAAACCTG AACAATGGGT AAAACAACAA GTTGATATAT ATCAAAAACT TACAGATACC TTAAAAGATA AACGCCAATA TATTCAAAGT GATCTCCAAA AAGCCCAAAT AAATGCTTGG GAATTTTTAG AAAAAGAAAT AGAATCTATT TTCCAAGATG CTTTTAATGC TATTCCTAAT TTTGCAGAAA ATCATTGGCA ATCTAATGAG ATAGCAATGA AAAACGGATG GCAACGCAAA ATGAGTTCAA TTCGTTTTGA AGAAAGATTA AAAACTGCCT TCCAAGAAGC ACAAGATAAT GTTAATCAAG AAGTACAAGA ATCTCTCGAA GAAGTCGGAA CTGAATTACA AATGATTGCT AAACTACAAA GCAATAACTT TAAATTTACT GTTCAGGATA CCAGTGATTT AGTGAAAAAT TTAATGGCAT TTGGGGGTGG TTTATTAGCT ATAGCAGCAT TATTTACACC AATAGCTCCA ATTTTCGGGA TTGTAGGAGG TGTTATGGCA ATGTTAGCAG GTTTTTTAAA ATCAAGAGAT CAAAAACGTC GTGAAGCAGT GCAAAAAATA TCCAGTAGTT TAAGGAGTCA ACTCCAGCAA CAGAAAATAA AAACTCGTGA ACAATTAAAA AATAGTCTCA ATCAATATTG TAATGAGGTT CAGCAGAATC TACAAAATTA TTTTGAGGAC TTGATTAAAG GATTAGATAG TATCGCTATA CATCTCAATA ATGCTAAATC CCATTTAAGT AATGCTACCA ATTATCTAAA CCGTGCTTAT GCTAAAAGAA TTGTTGATTG GAGTTTAGGA AAATATGAAC CATTAACAGA TAAAAAAATT AAATCAACTG TTGCTAGAGT TACAAGAGAT TTTGGGAAGT CTATGACTAT TGATACCAAA GCTCAACTCA CTTTACAGAA ATCTGAATTA GAAATTAAAC AAATTCTTCA AGAAGATGTC TGTATCAAAT CTATCACTTT TAATTATTAG
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Protein sequence | MSQEKLDYLF LLLAHILCAD QQIHLKENQA LHELATQANI GQRTLDEMNK ILDQEENHLK IKTVAQRIPL GQQNEAIRQV LALAYLDGFF SPLEKEMIEE IVKIWNWPQN YLVHILEEAE SFYPQSKDNN DNQEELSFAA RFLKNQYTSV FSRSFIPIAR KLAPETIGRT IERIEREILL SGPEYDEAIQ QCAKIAQEDY KYAKIALNRT SDTLKKLEEN LSNTIENLSN KTTSKGQANT AKEVAKQLNA SQTALGEEIV KELENVNNTF KSKQRALSHF SIAFMGKTKA GKSTLHAILT NEGWNAIGVG KQRTTRQNRV YEWKNIRIID TPGIGAPGGK TDEEIAQSVI DQCDIICYVV TNDSIQETEF GFMKLLKEKA KPLIILLNIK HNLRDPRRLE HFLNNSEKFF SKTGQSGLKG HFDRIYRYAK EHYNNDYFPI IPVMLLAAQM SLEPEHKLIK SQLFKVSKLQ DFLDSIRESL IKHGTIRRSQ TLLGSTVGEI VKPEQWVKQQ VDIYQKLTDT LKDKRQYIQS DLQKAQINAW EFLEKEIESI FQDAFNAIPN FAENHWQSNE IAMKNGWQRK MSSIRFEERL KTAFQEAQDN VNQEVQESLE EVGTELQMIA KLQSNNFKFT VQDTSDLVKN LMAFGGGLLA IAALFTPIAP IFGIVGGVMA MLAGFLKSRD QKRREAVQKI SSSLRSQLQQ QKIKTREQLK NSLNQYCNEV QQNLQNYFED LIKGLDSIAI HLNNAKSHLS NATNYLNRAY AKRIVDWSLG KYEPLTDKKI KSTVARVTRD FGKSMTIDTK AQLTLQKSEL EIKQILQEDV CIKSITFNY
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