Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3899 |
Symbol | |
ID | 8393249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 4009553 |
End bp | 4010623 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644981824 |
Product | photosystem q(b) protein |
Protein accession | YP_003139538 |
Protein GI | 257061650 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0661393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.162734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCATG TTATCCAACG TCGCCGAGAA TGGGATATAG GTAGCAGTTG GGACAAGTTT TGCCAATGGG TAACAAGTAC CGATAATCGC ATTTATATCG GTTGGTTTGG CCTGTTGATG ATTCCCACCT TAATCGCTGC TATCACTTGC TTTATTATCG CCTTTATTAC CGCTCCTGCT GTGGATATGG AAGGCATTCG GGAACCCATT TTAGGCTCAA TTTTGAGTGG TAATAACGTC ATTTCCGCCG CCGTCGTTCC CACTTCCGCC GCCATTGGCC TACACTTCTA TCCTATCTGG GATGCTGCGT CGATGGATGA ATGGCTCTAC AATGGAGGCC CCTATCAACT GATCATTTTC CATTTCTTAA TTGGAATTTG GTGTTATTTA GGTCGTTTGT GGGAATTGAG CTACCGTTTA GGTATGCGTC CTTGGATTTC CATCGCTTTT TCTGCCCCTG TTGCAGCAGC GACTTCTATC TTTCTGATTT ATCCTATTGG ACAAGGGAGC TTTTCTGAAG GAATGCCCCT CGGTATTAGC GGCACATTCC ACTTTATGTT AGCCTTCCAA GCTGCCCATA ATATCCTCAT GCACCCCTTA CATATGTTAG CGGTGTCAGG CATCTTTGCG GGGGCTTTAT TAGCTTCTTT GCACGGTTCC TTAGTCACTT CTAGCCTTAT TCGGGAAACC ACCATCGAAG AATCGATTAA TCAAGGGTAT CACTTCGGTC AGGAGGAAAC CACCTATAAT TTAGTCGCTG GCCACGCGGG TTATTTAGGT CGTTTGTTAA TTCCCAGTTT GGGATGGCAA AATAGCCGTT CAATTCACTT TATTTTAGGA GCTATTCCTG TTATTGGAAT TTGGTGTGCT GCCTTGGCTA TTGGGGTTAT GGCTTTTAAC CTCAATGGGT TTAATTTTAA TCAATCTATT CATGATAGCC AAGGTCATCC TATCCTCACC GAAGCTGATA TGTTAAATCG CGCTAATTTA GGCATTCGTG CCATGCACGC TCCCAATACC CATCATTTTC CTCTTACCTT AGCCAGTGGT GAAAGTGTTC CCCTTAGTTA A
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Protein sequence | MTHVIQRRRE WDIGSSWDKF CQWVTSTDNR IYIGWFGLLM IPTLIAAITC FIIAFITAPA VDMEGIREPI LGSILSGNNV ISAAVVPTSA AIGLHFYPIW DAASMDEWLY NGGPYQLIIF HFLIGIWCYL GRLWELSYRL GMRPWISIAF SAPVAAATSI FLIYPIGQGS FSEGMPLGIS GTFHFMLAFQ AAHNILMHPL HMLAVSGIFA GALLASLHGS LVTSSLIRET TIEESINQGY HFGQEETTYN LVAGHAGYLG RLLIPSLGWQ NSRSIHFILG AIPVIGIWCA ALAIGVMAFN LNGFNFNQSI HDSQGHPILT EADMLNRANL GIRAMHAPNT HHFPLTLASG ESVPLS
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