| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3888 |
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| Symbol | |
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| ID | 8393238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 3998711 |
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| End bp | 4000402 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644981813 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003139527 |
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| Protein GI | 257061639 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.203429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT TCCGCAACGT TCTTGTCGGT TTTTGTCTTG CTTTGTTCCT CGTACTGGGT
CTTTCGATAA CGGGATACGC TCAACAACAA ACCCCGAATC CTAGTCCGTC ACCACAGACT
ACCCTAGAAA CCCTTGGGGA AGGTTTTCCC GTAACCCTAG ACGGTTATAC CCTTTTTCAA
GTACATCACG GGACTGGTCC GTTGAACGCA GAGGAGAGAG CGCGCTCTCT CTCGCGGCGG
ATCGAGAGAA TTGCCTCAAA TGACAGTCTT TCTCTGAAGG ATCTGACGAT TCGAGTCGAT
CCGGCCGATA ACTCCCCCTC GATTATTTTA GGGGATAAGG TGATCCTCAC CGTTACCTCC
CAAGATGCCA AACTGTATCA GGAAACCCAG ACAAAAATCG CAAACCGCGC GCTAGGGGAA
GTGAAAACCG CGATCGAACG CTACCGGATC GCTCGTCAAG CCGATCATTT ATTACGGGGC
GCGATCCATA CAGCGATCGC CACGGGGGTG TTATACCTAT TGATCACCGC GATTCTATTC
CTATCGGGGC GAATTTTTCC CGCGATCCGA CGAACGATCA TCTCCCTAGT TCCGGGATGG
CGGATTCAGA ATTTTGAAAT CCTGTCACCG GAGAAAATCG GGAATATTGT GCTGCGGATT
CTGAAATTCC TTCGCCTTCT GGTAATTTTA ACCTTAGTGT GTTTCTATTT AACTTTCGTA
CTACGGTTAT TCCCGTGGAC GAGACAATTC GGCGATAACT TTCTCACGAC TTTTCTCAAT
ACGCTGGATC TGGTCGCTAA ACAGATCGCC ATTTATCTGC CGAATCTTCT CGTCGTCGCT
ATCATCACCG CGATCACCTA CTATGTTCTG AAAACGATCC GACCGTTTTT TACGGCGATC
GAGCGGGGAA ATCTGAGATT TCAGGGGTTT TATCCCGATT GGGCGCAACC GACCTATTTT
ATTTTAAAGT TCCTCATTAT CGCGCTGGCC GCGGTACTCG CGTTTCCCTA CCTGCCGGGG
TTTGATTCTC CCGCGTTTCA AGGGGTATCG GTCTTTTTAG GGATTTTATT CTCCCTCGGT
TCTACTTCGG TGATCGCCAA TATCGTCGGG GGAGTGATTT TAATCTATAC CCGCGCGTTT
CAACTGCGGG ATGTTATCTC GATTGGCGAT GTGACGGGAG ACGTGATCGA GAAAACCTTA
TTAGTTACCC GAATTCGCAC CCCCACGAAT CGCATCGTTA CAATTCCCAA CTCGGCTCTT
TTAAATACGA ATGTCGTTAA TTTTAGCGTC TCCCAGAGGG AATTTGATCG CCCTCTCATC
CTACAAACCA CAATCACGTT AGGCTACGAT CTACCGTGGC GAAAAGTTCA CGCCGTCCTC
ATCGAAGCGG CCTTAAAAAC CGAACATATC CTCCGCGATC CCGCGCCTTT CGTCCTACAA
GCGAGTCTCG ATGATTTCTC GGTGGCTTAT CAGGTGAACG CTTATACCGA TCACCCGCAA
TTATTTCCGA TTATCTATTC GGAACTACAC CAGAATATGC AGGATAAATG TAACGAAGCG
GGAATCGAAA TTCTCTCTCC CAATTATTTC GCCCTTCGTG ATGGTAATCA TTCAACCATG
CCCGAAAATT ATCTCCCAAC GGATTATCAA ACGCCGACCT TTGGCATTAA TTCGGGGAAT
CCGAACGGAT AA
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| Protein sequence | MKRFRNVLVG FCLALFLVLG LSITGYAQQQ TPNPSPSPQT TLETLGEGFP VTLDGYTLFQ
VHHGTGPLNA EERARSLSRR IERIASNDSL SLKDLTIRVD PADNSPSIIL GDKVILTVTS
QDAKLYQETQ TKIANRALGE VKTAIERYRI ARQADHLLRG AIHTAIATGV LYLLITAILF
LSGRIFPAIR RTIISLVPGW RIQNFEILSP EKIGNIVLRI LKFLRLLVIL TLVCFYLTFV
LRLFPWTRQF GDNFLTTFLN TLDLVAKQIA IYLPNLLVVA IITAITYYVL KTIRPFFTAI
ERGNLRFQGF YPDWAQPTYF ILKFLIIALA AVLAFPYLPG FDSPAFQGVS VFLGILFSLG
STSVIANIVG GVILIYTRAF QLRDVISIGD VTGDVIEKTL LVTRIRTPTN RIVTIPNSAL
LNTNVVNFSV SQREFDRPLI LQTTITLGYD LPWRKVHAVL IEAALKTEHI LRDPAPFVLQ
ASLDDFSVAY QVNAYTDHPQ LFPIIYSELH QNMQDKCNEA GIEILSPNYF ALRDGNHSTM
PENYLPTDYQ TPTFGINSGN PNG
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