Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3873 |
Symbol | |
ID | 8393223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3982145 |
End bp | 3982819 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644981798 |
Product | hypothetical protein |
Protein accession | YP_003139512 |
Protein GI | 257061624 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.727288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGATC AGCCTTTAAC AGTCAAATTT TTAGGTTTAA TAATACCCAT ATTATCAATA TTGATTGGTA TCAAAGATAC AAATGCGATG GTACTTACAC CTGTTGTAAA TACTAGCATA CAAGATGGAG GTAGATCTGG AATTATATCA TACGGAAATG CTAACGGACA GGGAGATTTC TTTAGTTCTC CAGGGTTTCT CAGAAATACA ACATCCATAG AAAACAGGGC TATTATAGAA TTTGATATAA GCTCATTCCA AAACGCATCT ATATTAAATG CTATGTTGGA TTTTGATCTT AGAGTTAACA ATTCGGGAGG CTCTCAATTT CGTCAATTTG ATGTTTATGT CTATGCTGGA AATGGTGGTG TAGAGTTAAG TGATTTTTCC GCAACTAATC TTGCATTAAG TCCTAGAATC AGTCTATCTG TCTCACAGAT TCAGCAATCT TATAACTTTA ATACAACAAA TATCTTAGAG GATTTTACCG ATAAAAAAAT AAATTTTATC GGGTTTGTTG TTGATCCCAT TGGAACTAAC AATTTTCCGA CTATTTTAGA AAATAGTAAA CTCACAGTAA CAGCGATCGC TGTTGTTCCT GAACCACTGA CGATTTTAGG GGTAGTCACT GCCATTGGAT TTGGTACATT CTTTAAACAA AAATTATCGA ATTAG
|
Protein sequence | MMDQPLTVKF LGLIIPILSI LIGIKDTNAM VLTPVVNTSI QDGGRSGIIS YGNANGQGDF FSSPGFLRNT TSIENRAIIE FDISSFQNAS ILNAMLDFDL RVNNSGGSQF RQFDVYVYAG NGGVELSDFS ATNLALSPRI SLSVSQIQQS YNFNTTNILE DFTDKKINFI GFVVDPIGTN NFPTILENSK LTVTAIAVVP EPLTILGVVT AIGFGTFFKQ KLSN
|
| |