Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3850 |
Symbol | |
ID | 8393200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3966647 |
End bp | 3967414 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644981775 |
Product | polysaccharide deacetylase |
Protein accession | YP_003139489 |
Protein GI | 257061601 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.100491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATCA TTATTATCTC ATTAATTGGA TTAATTATTT TATTTTTTTT GGCAATAATA TTATTTTTTC AACCCCGATG GCTCTTAAAA TTAGTAATAA AAATTGCTCC TGGTGTCACC TATTTTTTTG AAACTAATGA CCCCATTGTT GCTATTACTA TTGATGACAG TCCCCATCCT AAAACAACGC CTAAAATTCT GGAAGTCTTA GCTAAATATA AAGTTTATGC TACGTTTTTT ATTATTGGTG AACGAGTCTT AGGCAATGAA ACTATTATTA ATTATCTTCT CGAAAATGGG CATGAAATTG GCAATCATCT GATGAAAGAT GAAAAGAGTA TTGAGCTAGA TATTAATGAG TTTGAAGTTC AACTATTAAC AGCTAATTCA ACTTTAATAA CCTTACTCAA TCAATATAAT ACTACGATTA AAGAACCTAA ATTTCATCGT ATCACTTGGT TTCGTCCTGG GGGTGGTTGG TACAATTCTA AAATGATAGA AGTTGCCCAA AAACATGGCT ATCAATCCGT TTTGGGTTCA ATTTTTCCCT ATGATACTCA TATTTCTTCT TCTCAATTGG CCAGCTATCA AATTTTATTG AATTTACGTC CTGGGGCAAT TATTATTCTT CATGATAGTG GTAAGGATGG TATATCAGGA GAATGGGGAG AACGAACAAT ACAAACGTTA GAGACTATTC TTCCTGAAAT TAAACGTCGA GGATATCGAA CCGTAACATT ATCAGAAATG TTAGAATTAG AGAGATAA
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Protein sequence | MIIIIISLIG LIILFFLAII LFFQPRWLLK LVIKIAPGVT YFFETNDPIV AITIDDSPHP KTTPKILEVL AKYKVYATFF IIGERVLGNE TIINYLLENG HEIGNHLMKD EKSIELDINE FEVQLLTANS TLITLLNQYN TTIKEPKFHR ITWFRPGGGW YNSKMIEVAQ KHGYQSVLGS IFPYDTHISS SQLASYQILL NLRPGAIIIL HDSGKDGISG EWGERTIQTL ETILPEIKRR GYRTVTLSEM LELER
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