| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3828 |
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| Symbol | |
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| ID | 8393178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 3942700 |
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| End bp | 3944262 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644981753 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003139467 |
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| Protein GI | 257061579 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.109384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTT TTTATGATGC TCAATTATTG CAAGAGATTA TTCAACGAAC AGTTGAACAT
TTAATCTTAG TAAGTATTGC TATGGGGGCA GCGATCGCAG TGGGTATCCC TTTAGGCATT
ATTATTGCTA AACAGCCTAA ATTAGCTGAT CCTATTTTGG GAGTTGCAAA TGCCATTCAA
ACGATTCCTA GTTTAGCCAT TTTTGGCTTT TTAATTACCG TTCCCATCAT TGGAGGAATT
GGTAAAATTC CCGCGATTGT TGCCCTAATT CTCTATGCTT TATTGCCTAT TATTCGTAAT
ACTTATACAG GGATAAAGCA AGTGGATAAA GGAGTGAAAG AAGCAGCAAT AGCCCTAGGA
ATGAAAAACC GACAAATATT ACTCTTAATT GAAATCCCCT TAGCGTTAGG TATTATTTTA
GCCGGAGTTA GAGTTTCTAC CGTCATTTGT GTGGGAATTA CGACCATTGC TGCTGCTATT
GGGGCAGGAG GATTAGGGGT GTTTATTTTT CGGGGAATTT CCATGGTTAA TAACCAAATT
ATCCTCGCTG GTGCTATTCC ATCAGCTATC ATTGCTTTAG CAGCAGATTG GGGAATTGGT
TGGCTGGAAA AATCCCTAAG TCAGTACAAG ACAAATCAAC AAAAATCCAC TCAAAAAAGC
TTAATTATTT TTGGAATATT AGGATTGATT TTATTTAGTT TATTGGGAAT TTTTCATCAA
AAAATATTTT TAACAAATCA AGCCAGTGGT ATCGTAATTA TTGGCTCTAA AAATTTTACT
GAGCAGGTGA TTTTAGGAGA AGTATTAGCC CAAAGTATTG AAGCAAAAAC GAATTTAAAA
GTAGACAGAA AATTTAATTT AGGGGGAACT TTTATTTGTC ATCAAGCATT ACAAGCGAGA
AAAATTGATG GATATGTAGA ATATACAGGA ACCGCTTTTA CCGCAATTCT TGAACAGAAA
CCCATTAATA ATCCTCAAAC TGTTTATGAA AAAATTAAAC AAGTGTATCA TGATCAATTT
AACCTAGAAG TCATGCCATC CTTAGGATTT GAAAATACCT ACGCTATTCT CGTTCGGCAA
AAAGATGCCC AACAATATCA ACTAAAAACT ATCTCAGATG CGTCTCAATA TAGCCCCCAA
TGGCAAGCAG GATTTGGTCA TGAATTTTTA TCAAGAGAAG ACGGTTATCC AGGGTTAGCC
AAAACCTATA ATTTAAACTT TGCGACACTT CCAAAAACCA TGGAACTCGG TTTAATGTAT
CGCGCTTTAG CTAATCAAGA AATCGATTTA GCAGCAGGAA ATTCTACTGA TGGAACAATT
CCTATTTTAA ATTTAACGAT TTTAGAAGAT AATAAAAAGT ATTTTCCTCC CTATGAAGCA
GTCCCGATTT TTAATCAAGA AACTTTCAAA GACTATCCTA ACTTAAGGTC TATTATTGAA
CAATTAGCGG GAAAAATTTC CGCCCAAGAA ATGCAACAAC TCAATTATCA AGTGGATGGG
GAGAAAAAAT CAGTTAATGA AGTAGTACAC AAGTTTTTAA TCAAGAAGGG GTTAACATCT
TAA
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| Protein sequence | MNSFYDAQLL QEIIQRTVEH LILVSIAMGA AIAVGIPLGI IIAKQPKLAD PILGVANAIQ
TIPSLAIFGF LITVPIIGGI GKIPAIVALI LYALLPIIRN TYTGIKQVDK GVKEAAIALG
MKNRQILLLI EIPLALGIIL AGVRVSTVIC VGITTIAAAI GAGGLGVFIF RGISMVNNQI
ILAGAIPSAI IALAADWGIG WLEKSLSQYK TNQQKSTQKS LIIFGILGLI LFSLLGIFHQ
KIFLTNQASG IVIIGSKNFT EQVILGEVLA QSIEAKTNLK VDRKFNLGGT FICHQALQAR
KIDGYVEYTG TAFTAILEQK PINNPQTVYE KIKQVYHDQF NLEVMPSLGF ENTYAILVRQ
KDAQQYQLKT ISDASQYSPQ WQAGFGHEFL SREDGYPGLA KTYNLNFATL PKTMELGLMY
RALANQEIDL AAGNSTDGTI PILNLTILED NKKYFPPYEA VPIFNQETFK DYPNLRSIIE
QLAGKISAQE MQQLNYQVDG EKKSVNEVVH KFLIKKGLTS
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