| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3825 |
|---|
| Symbol | |
|---|
| ID | 8393175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3940625 |
|---|
| End bp | 3941302 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644981750 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003139464 |
|---|
| Protein GI | 257061576 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.19348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGGG GTGATCAAAT TTATGTTTAT CGAGAGTTAT TAAACCTCAA CGGGGTTTAT
GAACATCACG GCATCGATTG TGGAGATGGT TATGTTATTC ACTATCGAAA ACCGAGTGAG
ACAATCGAAA AAACAACCCT ATTAACCTTT ACTAGAGGAA ACTCTATTTA TCTTCGGGAA
TATCCCAACG AGTTTTGTTT TATTCCTGAT GTCGTTGTCA GTCGAGCCCA CGTCAGATTA
GGGGAACAAA AATACAATTT TTTGTTTAAT AATTGTGAAC ATTTTGCCAC TTGGTGTAAA
ACAGGAATCA ATCATAGTAC TCAAATTAAA GAGTTTCTTC CTTTTCTTAA ACATCTCAAT
GTTGCGGGAT TATATAACCC TTTAAAACAA GCCTTAAAAG AATCAGATCC CCAAAATGCC
CAACGATTAT TACAGGAAGC TTTAGACGAT ATTAGAGTGG TTTGGGACGA TCTTCAACCC
CAATATAAAC AAGCCATTAA AGAACGAGAT ACTTGGGATA AAGTTGCTAG AGAAGCAGTT
AAACGAAACC GAGATGATTT AGCCCGCGCT GCCTTAGAAA AAAAGTTAAC TTATCAACAA
AAAATTAATC GTTTCAAGGA ACAATTAGAT CAGTTAGCGA TTATGACAGA AAAAGTCTTA
AAAAATCTTT TAATATGA
|
|---|
| Protein sequence | MARGDQIYVY RELLNLNGVY EHHGIDCGDG YVIHYRKPSE TIEKTTLLTF TRGNSIYLRE
YPNEFCFIPD VVVSRAHVRL GEQKYNFLFN NCEHFATWCK TGINHSTQIK EFLPFLKHLN
VAGLYNPLKQ ALKESDPQNA QRLLQEALDD IRVVWDDLQP QYKQAIKERD TWDKVAREAV
KRNRDDLARA ALEKKLTYQQ KINRFKEQLD QLAIMTEKVL KNLLI
|
|---|
| |