Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3788 |
Symbol | |
ID | 8393138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3901379 |
End bp | 3902881 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644981713 |
Product | histidine kinase |
Protein accession | YP_003139427 |
Protein GI | 257061539 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0752677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGT CTCAAGGATT GCTGGTAAAA TTAAGTGATA TTATCAATCG TTATGAAGGA ATGGCGGTCG ATACTTGTCT ATCGCAACAA ACATCAGCTT TAGCTGAGAA TACCACTGAA CAAATTCACC AAGCAAGACT CAAAGCACAA AATGAATGGT TTGGAGCGAT CGCAGCCATT GAAAGTTTAC TCCTATCCCA AATTAACGAC ATTACCCCCG ACTCATCCAC CTGTCATGGG TTAATTCTCT CAGCCCCGAC CCCCATTCTT TGCCATCCTA AGCTAACGTC CCAACTTCAA ACAGGGGTCT TTACCCCCCA AGCGACTCAC CATTTATCCT TAATGCGGTT GCAACTTCCG GCAGCCTATA GCCCGAAATC AGTTTGTACT AAAGGAAATC TAGCAGAACT CCCCCTATTT CCTGAAGATC CCATCGCTAC AGAACAGTTT TGCCTGGTTT TTACCCCTCT TTTTGCTTTG ATTGCCGTTT TAGGAGAAGA TAGCCTCGGA CTCCCGGCCT TTCAATTTTC CTTTGAACCA GAGGTGATCG AACAGGGATG GTTAACCCTG CGATCGCGTC TTTGTTTAAC CCATTATCCC CAATTATCTC AACTAGATGC CTTAGTCAGA CATTTTGCGC CCCCTACCCC CGACTATCGC TTAGTGAGTC AATTTAGTCG CCTTTTGCTG CATCATTTAC CCCCTATCCC AACAGTAGAC TCAGATAAAC CGCGCTTAAC GATCTTAACA GGAGAAAATA CCGTTAAAAG TCATTCTAAT CGAAAAATTG CCAAAGAGAT AACAGACGAT ACCTCAGAAG TCCCCTTATT GCAAGCCCTA ACCCATGAAA TTCGCACCCC TTTGACCACT ATTCGTACCA TGACGCGGTT ATTGCTACGC AATAAAGAAT TAACCCCGCA AATGGTTAAA TTACTTGAAA CCATTGATCA GGAGTGTAGC GAACAAATTA ACCGTATGGA GTTGATTTTC CGCGCTACAG AAGTTAATAA TAGCCCTCAA GAGACAAAAC CAAGACATTT GGTGTCTACC TCCTTAGAAG AGGTGTTACA ACAGAGTATC CCCCGTTGGA AAAAACAGGC GCAACGGCGT AACGTGATGC TAGATGTGGT GGTTCCGAAA AAATTGCCCC AAGTCGTCAG TGATCCGGCG ATGCTCGATC AAGTGTTGAC GGGGTTGATC GAAAAATTTA CCCGCAGTTT CTCCGATGGC GGACAAATTC GGATTCAAGT CACCACCGCA GGACATCAAC TTAAATTACA ATTTCAAACG GAGTCCCATT GTCCCCATAA CCCCCTCAAA GCGTTGGGTA AGTTGTTGAT GTTTCATCCC AATACGGGCA GTTTAAGTCT TAATTTGGAT GTTACTAAAC ATCTGTTTCA TGAGTTGGGC GGTAAATTAA TTGTTCGTCA GCGATCTGAA TACGGAGAAG TGTTTACCAT TTTTCTTCCT TTGGGGAATA GAGAATCAGG AGTGATGGAA TAA
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Protein sequence | MAVSQGLLVK LSDIINRYEG MAVDTCLSQQ TSALAENTTE QIHQARLKAQ NEWFGAIAAI ESLLLSQIND ITPDSSTCHG LILSAPTPIL CHPKLTSQLQ TGVFTPQATH HLSLMRLQLP AAYSPKSVCT KGNLAELPLF PEDPIATEQF CLVFTPLFAL IAVLGEDSLG LPAFQFSFEP EVIEQGWLTL RSRLCLTHYP QLSQLDALVR HFAPPTPDYR LVSQFSRLLL HHLPPIPTVD SDKPRLTILT GENTVKSHSN RKIAKEITDD TSEVPLLQAL THEIRTPLTT IRTMTRLLLR NKELTPQMVK LLETIDQECS EQINRMELIF RATEVNNSPQ ETKPRHLVST SLEEVLQQSI PRWKKQAQRR NVMLDVVVPK KLPQVVSDPA MLDQVLTGLI EKFTRSFSDG GQIRIQVTTA GHQLKLQFQT ESHCPHNPLK ALGKLLMFHP NTGSLSLNLD VTKHLFHELG GKLIVRQRSE YGEVFTIFLP LGNRESGVME
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