Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3774 |
Symbol | |
ID | 8393123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3885486 |
End bp | 3886448 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644981702 |
Product | protochlorophyllide oxidoreductase |
Protein accession | YP_003139417 |
Protein GI | 257061529 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01289] light-dependent protochlorophyllide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0260841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAG ATCAAAAAAC CGTTATCATT ACAGGAGCCT CCTCTGGAGT AGGTTTATAC GCCGCCAAAG CCCTCATCCA AAAATGGGGC TATCATGTCG TTATGGCCTG CCGTAATTTA GATAAAACCT ACCGAGTTGC CCAAGAACTA GGATTTCCTT CGGATAGCTA CACCGTCCTT CCTATTGATC TCGGAAGTTT AGGGAGTGTG CGATACTTTG TTCAAGCATT TCGGGAAACC AAAAAACCCC TTGATGCCCT ATTATGTAAC GCAGCCATCT ATATGCCCTT ACTCAAAGAA CCCCTGCGAT CGCCAGAAGG GTACGAATTA ACCATGACCA CCAATCATTT AGGGCATTTT CTACTATGTA ACCTCCTCTT AGAAGATCTC CAACGATCAT CCTCCCCAGA ACCGAGAGTC GTCATTTTAG GAACCGTCAC CCATAACCCC GATGAATTGG GCGGAAAGAT CCCCCCTCGC CCGGATTTAG GCAATTTAGA AGGGTTTGAA GCCGGATTTG TTCAACCCCA TTCCATGATT GATGGTAAAA AATTTGAACC CGTTAAAGCC TATAAAGATA GCAAAGTCTG TAACGTTCTG ACCATGCGGG AATTACACCG ACGCTATCAC GACTCCACCG GAATTACCTT CAGTTCCCTC TATCCAGGGT GTGTCGCTAC CACTGCCCTC TTCCGTAACC ACTATCCCCT GTTCCAAAAA CTCTTCCCCC TCTTCCAAAA ACACATTACC GGGGGGTTTG TCTCTGAAGA ATTAGCCGGA GAACGGGTAG CGGATGTCGT CGCTGCACCT GAGTATAATC AATCTGGATC TTATTGGAGT TGGGGCAACC GTCAGAAAAA AGACCGAGAG TCCTTTGTCC AACAGGTTTC TCCTCAAGCC CGCGATGACG AAAAAGCCGA GAAAATGTGG GATCTCAGTG CTCAGTTGGT CGGACTAGCT TAA
|
Protein sequence | MTQDQKTVII TGASSGVGLY AAKALIQKWG YHVVMACRNL DKTYRVAQEL GFPSDSYTVL PIDLGSLGSV RYFVQAFRET KKPLDALLCN AAIYMPLLKE PLRSPEGYEL TMTTNHLGHF LLCNLLLEDL QRSSSPEPRV VILGTVTHNP DELGGKIPPR PDLGNLEGFE AGFVQPHSMI DGKKFEPVKA YKDSKVCNVL TMRELHRRYH DSTGITFSSL YPGCVATTAL FRNHYPLFQK LFPLFQKHIT GGFVSEELAG ERVADVVAAP EYNQSGSYWS WGNRQKKDRE SFVQQVSPQA RDDEKAEKMW DLSAQLVGLA
|
| |