Gene Cyan8802_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3686 
Symbol 
ID8393028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3764334 
End bp3764684 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content42% 
IMG OID644981611 
Productanti-sigma-factor antagonist 
Protein accessionYP_003139333 
Protein GI257061445 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.426422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTAC GGGGAACTCG TGAAGTCAAG GAAAATTACC AAATCTTTCG ACTTACTGGC 
CTCTTAGACG CTTTTTCTGA GCCAACCTTA CGCAAGGTAA TCGGTGAACA CATCGATGAA
GGTCCAGCCG ATGTCATTTT AGTCCTGTCT CAAATTGATT TTATCGATAG TTCTGGACTA
GGGGCTTTAG TCCAATTAGT GAAAAAAGCC CAAGGTTGCG GCGGTAGCTT ACAAATCGTT
ACTAACCCCA GAGTAACCCA AACCGTTAAG TTAGTTCGTC TAGAAAAGTT CTTGTCTCTC
CAAGATACTT TAGAAGCCGC AGAAGAATCT CTGAAAAAGC CCAAAAAATA G
 
Protein sequence
MSLRGTREVK ENYQIFRLTG LLDAFSEPTL RKVIGEHIDE GPADVILVLS QIDFIDSSGL 
GALVQLVKKA QGCGGSLQIV TNPRVTQTVK LVRLEKFLSL QDTLEAAEES LKKPKK