| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3642 |
|---|
| Symbol | |
|---|
| ID | 8392984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3714239 |
|---|
| End bp | 3715843 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644981568 |
|---|
| Product | nitrite transporter |
|---|
| Protein accession | YP_003139290 |
|---|
| Protein GI | 257061402 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.289797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGTG AAATGTGGAC GTTGCGTGGA CGGTATAAAA TCCTCCACCT GACTTGGTTT
GCTTTTTTTC TGACCTTTGT GGTTTGGTTT AATTTAGCTC CCTTAGCGAC ACAGGTACAA
GCTGATTTTG GCTTAGAAGT GGGTCAAATT AGAACCCTGG CTATCTGTAA CGTCGCTTTA
ACTGTTCCGG CTCGTATTAT CATCGGAATG CTCTTGGATA AGTATGGACC GAGGATAACT
TATACCCTAT TGCTAATGTA TGCAGCCATT CCCTGTATCA TTTTCGCCAC TGCCCAAAAT
TTTAATCAAT TACTGATTAG TCGGTTAGCT TTGGGTATTG TCGGGGCAGG GTTTGTCATT
GGTATTCGCA TGGTTGCAGA ATGGTTTCCC CCCAAAGAAA TTGGCTTAGC TGAAGGAATT
TATGGCGGTT GGGGCAATTT TGGTTCGGCG GCGGCTGCCT TCACCTTACC TGCGATCGCG
GGTTGGTTAG CCTTTGGGGC AATTAATCCT CAAACCGGAG AAGCGTTATT AAATTGGCGT
GTTTGTATCG CCGGAACGGG AATTATTGCA GCCCTTTACG GGATTTTCTA CTTCTTTAAT
GTTCAAGATC ATCCCCCTGG AAAAGTTTAC CGTAAACCCA AAAATGCTAG AGGAATTGAA
GTCACTACCC CTAAAGATTT TTGGTTTTTA TTACTAATGA ACATCCCCTT ATCGGGCATC
CTTATGGTAT TAGCTTGGCG GTTAAAAAAG CTTGGCTTAT ATGATGTCAA TACCTTGTAT
ATTGTGTGGA CATTTTTAGT CGGTTTATAT CTATTTCAAG CTTACAATTG TTGGGTAGCT
AATAAAGATT TAATGACCGG TAAAAAACGC TATCCCGCCG ATGATCGCTA TAATTTCTCC
CAAGTCGCCA TCCTAGAGTT AACCTATTTT GTCAATTTTG GCTCCGAATT AGCAGTAGTT
TCGATGCTTC CTGCTTTTTT TGAAGGAACC TTTACCCTCA GTCCTGCCCA AGCGGGAATG
ATTGCCTCTA CTTATGCTTT TATGAACTTA ATGTCCCGTC CAGGAGGAGG CTTAATTTCT
GATAAATTGG GTAGCCGTAA AAATACTATG GGAGTATTAA CGTTAGGCAT GGGTATTGGC
TATCTTTTTA TGGGAAGTAT GAATAATAAT TCTTGGCTTC CTTTAGCCGT TATTTTAACT
ATGGGTTGCT CTTTCTTTGT TCAAGCAGGA GAAGGCTCAA CTTTTGCCAT TGTTCCTCTC
ATTAAACGCC GTATTACAGG TCAAATTGCT GGCAATGTAG GAGCTTACGG AAATGTCGGT
GCAGTGGCTT ATTTAACGAT TTTTAGCCTA TTACCTGAAT GGTTAGGGGG AGGGGCAAAA
CCCACTCCAG AAATTATTGG ACAAGCCAAT ACAGCCTTTT TCCAACTGAT GGGAATTGCT
GCGGTTGTTG TCGCTTTCTT GTGTTGGTTT TTCCTCAAAG AACCCAAGGG TTCTTTTGCT
GACACCACGA AGGAGAAGAA GAACCGGAAG CCTTTCATCA TGACTCTATC TTACAAGCTG
ATCCTCCCAT GGAGTCTGTT GATTCTATTC CCAGAAGTTA AATAA
|
|---|
| Protein sequence | MLGEMWTLRG RYKILHLTWF AFFLTFVVWF NLAPLATQVQ ADFGLEVGQI RTLAICNVAL
TVPARIIIGM LLDKYGPRIT YTLLLMYAAI PCIIFATAQN FNQLLISRLA LGIVGAGFVI
GIRMVAEWFP PKEIGLAEGI YGGWGNFGSA AAAFTLPAIA GWLAFGAINP QTGEALLNWR
VCIAGTGIIA ALYGIFYFFN VQDHPPGKVY RKPKNARGIE VTTPKDFWFL LLMNIPLSGI
LMVLAWRLKK LGLYDVNTLY IVWTFLVGLY LFQAYNCWVA NKDLMTGKKR YPADDRYNFS
QVAILELTYF VNFGSELAVV SMLPAFFEGT FTLSPAQAGM IASTYAFMNL MSRPGGGLIS
DKLGSRKNTM GVLTLGMGIG YLFMGSMNNN SWLPLAVILT MGCSFFVQAG EGSTFAIVPL
IKRRITGQIA GNVGAYGNVG AVAYLTIFSL LPEWLGGGAK PTPEIIGQAN TAFFQLMGIA
AVVVAFLCWF FLKEPKGSFA DTTKEKKNRK PFIMTLSYKL ILPWSLLILF PEVK
|
|---|
| |