| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3588 |
|---|
| Symbol | |
|---|
| ID | 8392929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3654275 |
|---|
| End bp | 3655867 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644981519 |
|---|
| Product | glycosyl transferase family 39 |
|---|
| Protein accession | YP_003139242 |
|---|
| Protein GI | 257061354 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.196881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGC TCAAAAAGTT CTATAATCAG CAAAACTTTG ACATAAAATG GTTTTTGATT
TTCCTGATAG CAGCTTTATT ATTATGGTTA ATTGGACTAG GAAATTTATC CTTAAGAGAT
TGGGATGAAG GGTATTATGG AACTGTTGCA AAAGATATGT TTCGTACTAA TAATTGGTTA
TATTTAACCT ATTATAATCA GCCTTTTTTG CTGAAACCAC CCTTGATGAT CTGGTTAATC
ACTATTAGTT ATAAACTGGG AGGAATTAGT GAATTTACAA CGCGGTTTCC TTGTGCTTTC
TTAACAGCGT TAGGGGTTCC TTTATTATAT TTAGTAGCAA GAAATATTTT TACTTGTCAT
CTTCCTGCCG TATTAACGGG ATTGGTTTAT TTAACCTTAT TACCTGTAGT TCGTCATGGA
AGATTAGCCA TGTTAGATGG TTCAATTAAT ACCTTTTTTA TCTTTTCTAT TCTATGTTTA
TTATACTCTT GTCGTCAATC CTATTGGGCA ATTGGGGTAG GAATAGGATT AGGATTAATT
GCTTTAACTA AGGGGATTTT AGTGATTGCT TTGGGAGGAA TTATTGGTGT TTTTATTCTT
TTAAATAACC CTAAGAAATT CCTGAAAAAT CCTTATCTAT GGGGTGGGAT GATTGTGGGA
TTTACTCCTG TTTTTGCTTG GTATATTATC CAGATATTAC ACTATGGACA AAAATTTATA
GAGGTGCATT TTAAAGAGCA GAATTTTGAT CGCTTATCTA CCGCAGTTGA AGGAAATAAA
GGGTCATTAT GGTATTATTT TATTGAATTA CTCAAGTATA GTCTTCCTTG GTTACTATTT
TTACCAGGAG GAATCAAATT AGCTTGGCAA AAAAACCAAC AAACTTGGGC TAAATTAACT
CTAGTTGGGT TAATTTTGTT TATGGGAATT ATTACCTTTA TGGGAACTAA ATTACCTTGG
TATATTTTAC CCATTTATCC TTTTTTTGCT CTAGCGGTTG GTGCTTATCT AGCTGAACTA
TGGCAAAATA ATAATCAGTC CTATCCTAAA ATCCTAAGCA TTAGCTTATT TGTTTGTAGT
TTAGTTACTT TAGTGGGAGG AGTTTTTATA ATATTTACAG ATGATAATTT TGAAGTTATG
ATCTTTGCTA TAATGATAGG AACAACTTTA TTGTTATCTG CTTGGAATAG TTTACACAAC
AACGTAAAAT TTATTCCTAT TTTAGTTGTA GGATTATACC TAAGTTTAGG AGTATTTATG
CTATCAAACT CTTGGATATG GGAATTAAAT GAATCCTTTG CTGTCAAACC TGTAGCGACC
TTAATTAGAG AAAATACTCC TCCTGGTACA GTCGTTTATA CCTCTTTTGA TTATAGCCGT
ACTAGCCTAG ATTTTTACAG CGATCGCCAA GTTTTAGCCG AAAGTCAAGA AACCCTAAAA
AACTTAGCCT ATCGTCCATC TTATCTACTT TTAGATACTA AAACTTGGGA TAATTTCAAA
CAATCTGAGA GTCCTCTATC TCAAGCAAAA ATATTAGGTC ATGCAGAGGA ATTTATATTG
ATCAAAACTT TAGGAAATTT ATCTTCTAAA TAA
|
|---|
| Protein sequence | MHKLKKFYNQ QNFDIKWFLI FLIAALLLWL IGLGNLSLRD WDEGYYGTVA KDMFRTNNWL
YLTYYNQPFL LKPPLMIWLI TISYKLGGIS EFTTRFPCAF LTALGVPLLY LVARNIFTCH
LPAVLTGLVY LTLLPVVRHG RLAMLDGSIN TFFIFSILCL LYSCRQSYWA IGVGIGLGLI
ALTKGILVIA LGGIIGVFIL LNNPKKFLKN PYLWGGMIVG FTPVFAWYII QILHYGQKFI
EVHFKEQNFD RLSTAVEGNK GSLWYYFIEL LKYSLPWLLF LPGGIKLAWQ KNQQTWAKLT
LVGLILFMGI ITFMGTKLPW YILPIYPFFA LAVGAYLAEL WQNNNQSYPK ILSISLFVCS
LVTLVGGVFI IFTDDNFEVM IFAIMIGTTL LLSAWNSLHN NVKFIPILVV GLYLSLGVFM
LSNSWIWELN ESFAVKPVAT LIRENTPPGT VVYTSFDYSR TSLDFYSDRQ VLAESQETLK
NLAYRPSYLL LDTKTWDNFK QSESPLSQAK ILGHAEEFIL IKTLGNLSSK
|
|---|
| |