| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3570 |
|---|
| Symbol | |
|---|
| ID | 8392911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3636617 |
|---|
| End bp | 3637258 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644981501 |
|---|
| Product | protein of unknown function DUF820 |
|---|
| Protein accession | YP_003139224 |
|---|
| Protein GI | 257061336 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00692093 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTA TTCAACCAAG TATTGCCGAA AATCGAGTTA TTTTAAATAA TATTACCTGG
GAAACCTTTA ATCAACTTCT TCTGGAATTA GGAGAAAACA GAGCTAGTCG TTTAGCTTAT
AATGACGGAA TTATTGAAAT TATGACTCCC TTTGGACAAC ATGAACATAG TAATCGCTTT
ATTGATGATT TAATTCGAGT CATTGCCTTA GAGCTTAACT TAAATATCAA AAAAATGGGG
TCATTGACGT TAAAAAAAGA TTTGATCAAA AAAGGTGTTG AGCCTGACTC TTGTTATTAT
CTAACAAATG AACCTTTGGT AAGACATAAA CAAGATATTA GACTGAATAT CGATCCGCCT
CCTGATTTAG TGCTAGAAAT TGATATGAGT AATAGTTCCT TGAATAAGCT CCCCATTTAT
GTTGCTTTGG GAGTTCCTGA AGTTTGGCAG TATCAAGGCA GTACATTAAT TGGGTTTATT
TTAGATAGCG ACAATCAAAA TTATGCTCAA TCTGACTATA GTTTAGCTTT TCCTTGGTTA
GAACTAGCCC AAATTCCTCC GTTTATTCAA CAAAGTTTAA GAGATGGAGA AACGGCAACA
TTAAAAGCGT TTTCCCAGTG GGTTAAGCAA CAAAATCACT GA
|
|---|
| Protein sequence | MQTIQPSIAE NRVILNNITW ETFNQLLLEL GENRASRLAY NDGIIEIMTP FGQHEHSNRF
IDDLIRVIAL ELNLNIKKMG SLTLKKDLIK KGVEPDSCYY LTNEPLVRHK QDIRLNIDPP
PDLVLEIDMS NSSLNKLPIY VALGVPEVWQ YQGSTLIGFI LDSDNQNYAQ SDYSLAFPWL
ELAQIPPFIQ QSLRDGETAT LKAFSQWVKQ QNH
|
|---|
| |