| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3567 |
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| Symbol | |
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| ID | 8392908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 3634986 |
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| End bp | 3635972 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644981498 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_003139221 |
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| Protein GI | 257061333 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000319642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACTG CTAACGTCAA CTCAAAAACG AAACAACCTA TGTATTCAGC AGATATGGTG
CGGACTTATC TGCATGAAAT TGGGCGAGTA CCCTTGTTAA CCCATGAACA GGAAATCGTT
TATGGGAAGC AAGTACAAAG AATGATGTCC CTGTTCGAGA TGAAAGACCA ACTCACTCAA
GCGCAAGGTA CTGAACCGAG TGACAAGGAG TGGGCTAAAG CGGTTAATTT GAAGGAACCC
GAACTCCAAA AAACCATCGA ACAGGGAAAC CGGGCTAAGC GTAAGATGAT CGAAGCGAAC
TTACGTTTAG TAGTTGCCAT TGCCAAGAAA TACCAGAAGC GCAACATGGA ATTTCTCGAC
CTAATTCAAG AAGGAAGCCT AGGATTAGAA CGGGGAGTGG AGAAATTTGA CCCAACCAAA
GGCTATAAAT TCTCAACCTA CGCTTATTGG TGGATTCGTC AAGCGATTAC CCGGGCGATC
GCACAACAGG CTCGTACCAT TCGTTTGCCC ATTCATATCA CTGAAAAACT CAACAAAATT
AAGAAAACCC AACGAGAACT TTCGCAAAAA CTAGGACGCA GTGCTACTCC GGCTGAAATT
GCGGCGGTAC TTGAAATTGA GCCGTCTCAA ATTCGGGAAT GTTTAAGCAT GGCACGTCAA
CCCATTTCCC TAGATGTGCG GGTGGGAGAT AATCAAGATA CGGAACTCTC GGAATTATTA
GAAGATCACG AGGCTTCCCC TGATCAATAT ATTACCCAAG AGTTACTCCG CCAAGACCTC
AAGAACTTGA TGGAGGAATT AACCCCCCAA CAGCGATCAG TTCTCATTCT TCGCTTTGGG
TTAGAAGATG GGAAGGAACT CTCTTTGGCT AAAATTGGTA AAAAACTCAA TATTAGCCGA
GAACGGGTTC GTCAGTTGGA ACATCAAGCT CTTGCTCAAC TTCGCAGACG TAGAGCTAAT
GTTAAGGAGT ATCTCGCAGC GAGTTAA
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| Protein sequence | MPTANVNSKT KQPMYSADMV RTYLHEIGRV PLLTHEQEIV YGKQVQRMMS LFEMKDQLTQ
AQGTEPSDKE WAKAVNLKEP ELQKTIEQGN RAKRKMIEAN LRLVVAIAKK YQKRNMEFLD
LIQEGSLGLE RGVEKFDPTK GYKFSTYAYW WIRQAITRAI AQQARTIRLP IHITEKLNKI
KKTQRELSQK LGRSATPAEI AAVLEIEPSQ IRECLSMARQ PISLDVRVGD NQDTELSELL
EDHEASPDQY ITQELLRQDL KNLMEELTPQ QRSVLILRFG LEDGKELSLA KIGKKLNISR
ERVRQLEHQA LAQLRRRRAN VKEYLAAS
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