| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3536 |
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| Symbol | |
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| ID | 8392877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 3602759 |
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| End bp | 3605662 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644981469 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003139192 |
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| Protein GI | 257061304 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAATCA CGCTGCTGCA AAAATTTCAG TATAAAATTC CCTTGAGAAC CGTCCTCGTG
GTTCCTTTTG TCATTCAAAT TGTTGGTGCA GTGGGTTTGG TGGGTTATCT TTCCTTTAGA
AATGGTCAGA AAGCCGTTGA AGATTTAGCG GGTCAGTTAA CCAATGAAGT TAGCAATGTC
ATTATTGAGC GTTTGAACAG TTATTTAGGG ACTCCCCATC TGGTTAATCA GCTTAATAAA
AATGCGTTAA ATTTGGGGCA ATTAAATCTC CAGAATATCA AGGCAATTGA ACGTCATTTT
TGGCAACAGG CACAAGTTTT TGAGTTAGTT AGTAAAATTC AGTTTGCTGG TGTTGATGGA
AAATTTATTG GATTAGCGAT CAATGATGAT GGAACTCTTG ATTATCAAGA AAGAGATCGA
TCAGGTGACT TACAAACCTA CGCTATTAAT AGTCAAGGAA ATCGTCGAGA AAGACTAAGG
ACGTATATAG GTTTTGATGC CCGTCTTCAA CCCTGGTATA TTGCTTCTGA AAGAGCAGGA
AAACCCGTCT GGAGTCAAAT TTATCCTTGG GTTAGTCCTC CTACCTTAGC CATTACGTTG
GGTGAATCTT ATTATGATAA AAACGGCAAA TTTCAAGGGG TCTTAGCAAC GGATTTAACC
CTACTGCAAA TTAGTGACTT TCTTCGCAGT TTAAAAATTG GGCGATCGGG TAAGACATTT
ATTATAGAAA GTTCAGGTCA ATTAGTAGCT AGTTCTTCTG CTAAATCGCC TTTTTTAATG
GTTGATAATC AACCTCAGCG ACTTAGTGCT ACCAATCTTG AAGATTCCTT AATTCGTCCA
GCAGCATTTT ATTTACAGAA AACGTTGGGA AATATAAAAA CAGCATCACC AGAAGATATT
ATCCCGATCG ATATTCCTCA AAAACTAAAA TTTAAAATTC ATGGCAAGCA TCACTTTATG
AAAGTATTGC CTTTTCAAGA TGATTTTGGA CTGGATTGGT ACATTGTTAT TGTTGTCCCT
GAAAGCGATT TTATGCAACA AATCGAGGCA AATAATAAGA CAACTTTTGC TTTAGTTATT
GCTGCTTTAA TTTTAGCAAC AACCTTGGGA CTTTTGACCT CGCGGTGGAT TGTTGAACTG
ATTTTACAAC TAAATCAAGC CGCTCAACAA ATTGCAGAAG GAAATCTTAA AACCAAAGTC
AATATTAAAG GGATAAAAGA ATTAGAAAGC TTAGGAATAA CTTTCAATGT TATGGCAAAT
CAAATTAAAG ATTATTTTGA AGCGTTAGAA GCTAAAAATG AAGATCTTGA GCAAGCAAAA
GCTGATTTAT TAGAAGCCAA AGAAAAATTA GAAACAATTT TAGACGCAGT TCCTGGTTCA
ATTTCTTGGA TTGATTCTCA AGGATTTTAT CTAGGTGTTA ACCGTTACCT ATCTGATAAG
TGGAATTTGC CAGCAGAAGA ATTTATCGGG AAACCTATTG GATTTCTCCA AGGAAATGAC
CACTTAATCG AGTTTTTGTT TAGCTTTCTA GAAAGTTCTA AAGATGCGGA TTCGCAAGTG
GTTGAAATAA CCTTCAATGA CTGCCTAGAA TATTATCTTA TCGCTGCTCA AAAATATCAA
GGTGGTAATG CGACAGTTTC CATTGGCATT AATATTACAG AACGCAAAAA AGCTGAAGAA
AAGCTGACTC AAACCGTTAA AGAATTATCA GATATCAAAT ACGCATTAGA TCAATTAGCT
ATTGTTACGA TTACCGATGC TCAAGGTAAT ATTAATTATG TTAATGATAA GTTTTGTGAA
GTATCTCAAT ATTCCCCAGA GGAATTAATT GGTAATAACC ATCGTATACT CAAATCAGGT
TATCATGATC GCGCCTTTTA TAAAGAGCTT TGGTCAACTA TTTCTAGTGG ACAAATTTGG
CAAGGAGAAA TTAAAAATAA AACCAAAGAT GGAGCATTTT ATTGGGTTAA TAGTACCATT
ATTCCTTTTT TGGATAAAAC TGGTCGTCCC TTTCAGTATT TAAGTATTCG GACAGAAATT
ACGGCTCGTA AGGAATTAGA ACAAACCTTA GAAAGTATTG TTAGTAAACG CACGGCTCAA
CTAGCAGCAG CTAATCAAGA AATTACCGAT CTCAATAACA AATTAAGGTT AGAAAATGTT
CGCATGAGTG CAGAACTTAA CGTTGTTTTT CAAATGCAGC AGATGATTTT ACCAAAAGTT
GAAGAATTAA GAGGAATTGA AGGATTAGAG TTAGCTGGAT TTATGAAACC TGCTGCGGAA
GTTGGAGGAG ATTATTATGA TGTTTTGCAT CATGATGGAA TCGTTACTTT AGGCATTGGA
GATGTTACCG GCCATGGTTT AGAAAGTGGG ATTTTAATGG TCATGACTCA AACAGCAGTA
CGGACTCTTA AAGAAATAGG AGAAACTGAT CCTATTCGCT TTCTATCGGC TTTAAATCGC
ACAATCTATC AAAATTTACA ACGAATGAAT TCCGATAAAA ACTTGAGCTT AGGGATTCTT
CATTATTACC AAAGACAACT GAGAATAAGT GGCCAACATG AAGAAATTTT ACTGGTTCGT
TCTGGAGGAA AAATTGAACG AATTAATACA ATAGATCTCG GCTTTCCGAT TGGTTTAGAT
CATGACATTT CCCATTTTGT TGATCAAGTT TGTGTTGAAT TAAACCCCGG AGATGGGGTT
ATTCTCTATA CTGATGGTAT TACGGAAGCA AAAGATATTA ATAGGAATTT TTATGGATTA
AACAGATTAT GTGACGTTGT TAGTCAAAGT TGGCAAAAGT CCGCACAAGA AATTCAAGAG
GCAGTGATTG AAGATGTGTA TCAGCATATT GGAGAACAAA AAGTTTTTGA TGATATTACT
TTGTTGGTGC TTAAACAAAA ATGA
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| Protein sequence | MLITLLQKFQ YKIPLRTVLV VPFVIQIVGA VGLVGYLSFR NGQKAVEDLA GQLTNEVSNV
IIERLNSYLG TPHLVNQLNK NALNLGQLNL QNIKAIERHF WQQAQVFELV SKIQFAGVDG
KFIGLAINDD GTLDYQERDR SGDLQTYAIN SQGNRRERLR TYIGFDARLQ PWYIASERAG
KPVWSQIYPW VSPPTLAITL GESYYDKNGK FQGVLATDLT LLQISDFLRS LKIGRSGKTF
IIESSGQLVA SSSAKSPFLM VDNQPQRLSA TNLEDSLIRP AAFYLQKTLG NIKTASPEDI
IPIDIPQKLK FKIHGKHHFM KVLPFQDDFG LDWYIVIVVP ESDFMQQIEA NNKTTFALVI
AALILATTLG LLTSRWIVEL ILQLNQAAQQ IAEGNLKTKV NIKGIKELES LGITFNVMAN
QIKDYFEALE AKNEDLEQAK ADLLEAKEKL ETILDAVPGS ISWIDSQGFY LGVNRYLSDK
WNLPAEEFIG KPIGFLQGND HLIEFLFSFL ESSKDADSQV VEITFNDCLE YYLIAAQKYQ
GGNATVSIGI NITERKKAEE KLTQTVKELS DIKYALDQLA IVTITDAQGN INYVNDKFCE
VSQYSPEELI GNNHRILKSG YHDRAFYKEL WSTISSGQIW QGEIKNKTKD GAFYWVNSTI
IPFLDKTGRP FQYLSIRTEI TARKELEQTL ESIVSKRTAQ LAAANQEITD LNNKLRLENV
RMSAELNVVF QMQQMILPKV EELRGIEGLE LAGFMKPAAE VGGDYYDVLH HDGIVTLGIG
DVTGHGLESG ILMVMTQTAV RTLKEIGETD PIRFLSALNR TIYQNLQRMN SDKNLSLGIL
HYYQRQLRIS GQHEEILLVR SGGKIERINT IDLGFPIGLD HDISHFVDQV CVELNPGDGV
ILYTDGITEA KDINRNFYGL NRLCDVVSQS WQKSAQEIQE AVIEDVYQHI GEQKVFDDIT
LLVLKQK
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