| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3505 |
|---|
| Symbol | |
|---|
| ID | 8392844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3572061 |
|---|
| End bp | 3573305 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644981439 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_003139163 |
|---|
| Protein GI | 257061275 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.699164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0919169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC TTTTCCCTAA CATTGGCTTC AATCAATTGC CTAAATCAGC TTATATTCAT
ATTCCTTTTT GTCGTCGTCG TTGCTATTAT TGTGATTTTC CTATTTCCGT TTTAGGAGAT
AAAACAGATA TTTATACTGC CTCTTCTATT ACCCATTATG TAGAGGTTTT ATGTCAAGAA
ATTCTGGTTA CTCCGTTTCA AGGGAATGGG TTAGAAACTG TCTTTTTTGG CGGAGGAACT
CCCTCATTAT TACCTCCTAA CCATCTTGAA ACTATTCTGA GTACCTTAGA TCAAAAATTT
GGGATCTTTG CTAATGCCGA AATTTCTCTA GAAATAGACC CTGCAACGTT TACACTAGAA
CAATTACAAC GTTATCATGA CTTAGGGATC AATCGAGTTA GTTTAGGGGG ACAAGCATTT
CAGGACAATT TATTAGAAAC TTCTGGACGA TTACACCGAG TTAAAGATAT TTTTGAAGCC
ATTGACTATA TTCATAAAGT AGGGATAAAC AATTTTAGTC TAGATTTAAT TTCTGGATTG
CCTAATCAAA GTATAGAAGA TTGGATTTTT TCCTTAGAAA CTGCTATTAA TATCTCCCCT
AGTCATCTTT CTTGTTATGA TTTAGTCCTT GAGCCAGTAA CTGCATTTGG CAAGCAATAT
AAACCTGGGA AAAAACCTTT GCCAAGCGAT GAAATAACCG CTAAAATGTA TCGAATATCT
CAAAAAATAC TGACGGATGC AGGGTATGAC CATTATGAAA TTTCTAATTA TGCAAAACCG
GGTTATCAAT GTCTACATAA TCGAGTCTAT TGGGAAAATA GACCCTACTA TGGTTTTGGA
ATGGGAGCAG CTAGTTATAC CAATCAACAA CGATTTACTC GACCTCGTAC TCGAAAAGAT
TATTATGAAT GGGTCAATAA GTTATCTAAA ACACAAGGAT TAATCGATTG TGAAGTATCA
TCAAAAACAG ATTTTTTGCT AGAAACATTA ATGCTTGGTT TGCGCCTTAA AGAAGGAATT
AAATTATCAT TTATTAGCGA TGTTTTTGGT AAGCAAATCT CTCAAAAAAT TTTAGATATT
TTAGCACCTT TTATTAAGCA AAGTTGGATA GAGTTACCTC CTAACAGTAG TTTAATTCAC
TTAGAGAATA TTGATCGTAT TTCTTTAAGT GATCCTGAAG GATTTTTATT CTCTAATACC
ATTCTATCGA CTTTATTTGA GAAATTAGAA GAATGTGGGA ACTAA
|
|---|
| Protein sequence | MTQLFPNIGF NQLPKSAYIH IPFCRRRCYY CDFPISVLGD KTDIYTASSI THYVEVLCQE
ILVTPFQGNG LETVFFGGGT PSLLPPNHLE TILSTLDQKF GIFANAEISL EIDPATFTLE
QLQRYHDLGI NRVSLGGQAF QDNLLETSGR LHRVKDIFEA IDYIHKVGIN NFSLDLISGL
PNQSIEDWIF SLETAINISP SHLSCYDLVL EPVTAFGKQY KPGKKPLPSD EITAKMYRIS
QKILTDAGYD HYEISNYAKP GYQCLHNRVY WENRPYYGFG MGAASYTNQQ RFTRPRTRKD
YYEWVNKLSK TQGLIDCEVS SKTDFLLETL MLGLRLKEGI KLSFISDVFG KQISQKILDI
LAPFIKQSWI ELPPNSSLIH LENIDRISLS DPEGFLFSNT ILSTLFEKLE ECGN
|
|---|
| |