| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3423 |
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| Symbol | |
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| ID | 8392759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 3489757 |
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| End bp | 3491286 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644981359 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003139085 |
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| Protein GI | 257061197 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.678336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACG GCTTTAAAAA ACCACATATT CTTGAACAAA CGCAAAATCA TTTATTAGAA
GATGATGAAT TAATTTTACC CATTGTGGAA ACGAACCCTA GGGATGATTG GGCTCATTCA
ACAAAAGATC TGCTAGATAC TTTGCCCCGT GTTTGGACAA GGGGTTTGCT GTACTTTTTG
GTGATTTTTG TTAGTATTGC TTTGCCTTGG GCAATGTTAG CCAAAGTGGA TGAAACAGGA
AAGGCGATCG GCAAGTTAGA ACCCAAGGCA AAAACCTTAA AATTAGATGC TCCTGTCGAT
GGAAAGATTG CTTTCATTAA TGTCAAAGAA GGCGATATTG TTAAGCCAGG ACAACGGTTA
ATTGAGATTG AATCTGAGTT AATCCAAGGG GATTTAAAAC AGCACCAAAC TAAACTAGAA
GGAGAAGAAC AACGGTTACA TCAATTAAAT ATTTTAGAGA AACAATTACA GTTAGTTTTC
CAGACTCAAC AGCAACAAAA TGAAGCCCAA AAATTAGAAA AACTTGCTCA AGTAAATCAA
GCAAGACAGA ACCTTGATCA ACTGAGAAAT TCCTATGGAT TACAAAAGGA AGAAAAGCAA
GCACAAGTCA ATCAAGCTCA ACAGGATTTA GAACATAATC AAAAAGCCGT TAAATTGGCA
GAAATTCAGT TAAAAAATGC CCAAGGGGTT AAAGATCGTT ATTCCTCTGC CGTTGAAGAA
GGGATTGTTT CCCAAATTCA GGTAGTAGAA AGGGAAGATA CGGTACAGGA AAGGAAAAAA
ACCTATGAAC AAGCCAAGTC TGATATTGAA CAGGCAAAAC ATCGTTTAGC AGAACAAAAA
AGTAGTTATG AACGGACGAT TAAACAAGCT AGTGCTGATA TTAAGGAAGC AGAATTAAGG
CTGAAAGAAC AAGAAAACAG CTATGATAGT TTAGTCCAGT CAGGGGAACT ATCTTTGCTC
AAAAATAAAG AACAAATTAA TAACCTACAA ACGGAAATGA CGACCCTTAA ATCAGACATA
AAACAAACCA AAAGTCAAAT TCAAAATTTG CAGTTTCAGT TAAGCCAAAG AGTCGTAAAA
GCTCCCGTTG CAGGAACGGT TTTTGATTTA CCGATTGAAG CGGAAGGAGC CGTTGTTCAA
CCAGGAAATC GACTTTTAGA AATTGCGCCT CAAGGAACAC CTTTGATTTT ACGAGCGCAA
ATGGCTACAT CAGAAAGTGG TTCTGTGACT AAAGGAATGC CTGTTAAAAT AAAGTTTGAT
GCCTATCCTT TTCAGGATTT TGGGATAATA GAAGGAAAAT TAATTGAGGT TTCTCCAACG
ACATCAGAGA TAGATACCTC AGAGGGTAAA ACATTAGCTT ATGACCTAAA AATTGAACTC
AATCAAACTT GTATGCCAAC CCCTAAAGAG TGTATTACAT TACGTCCTGG CGATACAGCA
ATTGCAGAGG TTATTATCCG TCAGCGTCGC ATGATTGATT TTGTTCTTGA TCCCTTTAAG
AAATTACAAC AAGGAGAGTT TAAGCTTTAG
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| Protein sequence | MTNGFKKPHI LEQTQNHLLE DDELILPIVE TNPRDDWAHS TKDLLDTLPR VWTRGLLYFL
VIFVSIALPW AMLAKVDETG KAIGKLEPKA KTLKLDAPVD GKIAFINVKE GDIVKPGQRL
IEIESELIQG DLKQHQTKLE GEEQRLHQLN ILEKQLQLVF QTQQQQNEAQ KLEKLAQVNQ
ARQNLDQLRN SYGLQKEEKQ AQVNQAQQDL EHNQKAVKLA EIQLKNAQGV KDRYSSAVEE
GIVSQIQVVE REDTVQERKK TYEQAKSDIE QAKHRLAEQK SSYERTIKQA SADIKEAELR
LKEQENSYDS LVQSGELSLL KNKEQINNLQ TEMTTLKSDI KQTKSQIQNL QFQLSQRVVK
APVAGTVFDL PIEAEGAVVQ PGNRLLEIAP QGTPLILRAQ MATSESGSVT KGMPVKIKFD
AYPFQDFGII EGKLIEVSPT TSEIDTSEGK TLAYDLKIEL NQTCMPTPKE CITLRPGDTA
IAEVIIRQRR MIDFVLDPFK KLQQGEFKL
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