Gene Cyan8802_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3404 
Symbol 
ID8392740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3474132 
End bp3475337 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content38% 
IMG OID644981341 
Productpentapeptide repeat protein 
Protein accessionYP_003139067 
Protein GI257061179 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.559073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA TTGCAGCAAT TCTTGTCGTA ACTCCTTTAT TCCTAAGTTC TGTCGTCAAA 
GCCGAAAATC CTAGTTCAGT ACAACGGTTA TTAACAACTA AAGAATGTAT CGGTTGTAAC
TTACAAAATG CTAACCTAAA AGGCCTTAAT TTAGAAGGAG TCAATCTAGA AAAAGCCAAC
TTAAAAAATG CTAATTTGCA GGGAGCTAAC CTGAACAATG CTCACCTCAA ACAGGCCATT
TTACAGGATG CTCGATTGAT GGATGCTCAA CTCGAAGGAA CTGTACTCGA AGCAGCTAAT
CTGATCAATA CAAAGCTTGA TGGTGCTAAT TTAAATAATG CTAACCTTAA AGGCGTTAAT
CTGGTCAATT CACAGATGAA TGGCATTATT TTGACTAATG CAAACTTAGA AGGAGCCACA
ATGAGGGGTG TTTCCCTCCA AGAAGCCAAT TTAGATGGAG CTATCTTAAT CCAGGCTGAT
TTAACCGTTC ATGATGAAAA ACGAGCGAAT CTGACGGGTG CGAGTCTCAA AAATGCGGAT
TTGTCAGGGG CACATCTTCG CGGTATCAGA CTCAAAGATG CTAACCTTGA AGGGGCTAAT
CTGGAAAAAA CTGACTTTAC CCGCGATATT CCTAATAATA CCACCGCTAA AGGAGCTCTC
AGTGTAGCTA CCTCACCCAT TCCCTTAGTT TTGCCTGGTG CTGTCTTGGG TGCTATTGGG
AACTTTGCTA TTGGAGAAGC TTCTGCGTTG AATGCGGATG TTAGTAATAC CAATTTAGCA
GGAGCCAATT TAGAAGAAGC TAATCTCCAA GACATTAATT TAGAGAACTC CAATCTCAAG
AATGCTAACT TAGAAAAAGC TAATTTACAC AATGCTTATT TAGTCAATAC GAATTTGACT
AATGCCAATT TAAGTTTAGC CAAATTAACT AATATTAATA TGGAGGGAGT TAACTTAAGT
AGTGCTAACT TAGCCGGGGC TAATTTGGAT AAATCCTATC TAGCTAAAGC TAATTTGACT
AATGCTAAGC TTGAATCAGC CAAATTAACG AATGTTAATT TAACGGACAC TCAGTTAACA
AATGCTAACT TAATGAAAGC CCAATTAGCT AATGCTAACT TAAGCAATTC TAACTTGTGT
GGGGCAACCA TGCCTGATGG TTTGATTTCT CAAATAGGAT GTACTGCGGC CAATATTCAG
TCATAA
 
Protein sequence
MKTIAAILVV TPLFLSSVVK AENPSSVQRL LTTKECIGCN LQNANLKGLN LEGVNLEKAN 
LKNANLQGAN LNNAHLKQAI LQDARLMDAQ LEGTVLEAAN LINTKLDGAN LNNANLKGVN
LVNSQMNGII LTNANLEGAT MRGVSLQEAN LDGAILIQAD LTVHDEKRAN LTGASLKNAD
LSGAHLRGIR LKDANLEGAN LEKTDFTRDI PNNTTAKGAL SVATSPIPLV LPGAVLGAIG
NFAIGEASAL NADVSNTNLA GANLEEANLQ DINLENSNLK NANLEKANLH NAYLVNTNLT
NANLSLAKLT NINMEGVNLS SANLAGANLD KSYLAKANLT NAKLESAKLT NVNLTDTQLT
NANLMKAQLA NANLSNSNLC GATMPDGLIS QIGCTAANIQ S