Gene Cyan8802_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3400 
Symbol 
ID8392736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3468617 
End bp3471259 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content33% 
IMG OID644981337 
Productputative signal transduction protein with Nacht domain 
Protein accessionYP_003139063 
Protein GI257061175 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTG ATGCCATAGT TAAATCCAAT TTACCTAAAT CCAGACCAGA TTACGATGTT 
TTTATTTCTT ACTCTCGTCG AGATAAGGAG TTTGTTCGTC TTTTGTGGGA AAAACTGCTA
GAGGCTAATT ATACAGTTTG GGTTGATTGG CAAGATATTC CCCCGGCTGA AGATTGGAGA
CAAGAGATTT ATCAAGGCAT TGAAGCCTCC CATAATTTTC TTTTTATTAT CAGTTCCCAT
TCTCTTACGT CTGTTTTCTG TCAAGAAGAA TTGACTTATG CTATTAATCA TAATAAACGC
CTGATTGCTA TTATTATTCA AGAGCCACAA AACGAAGATA TTAATCCCGA CTTAGCGAAA
ATAAATTGGA TTTTTTGTTC AGGATGTAAT GGTGAAGAAT GTGATAATTT TAAGCAAAGT
TTTCAACAAT TACTTCAAGC TCTTGAAACA GACTTTAATT ATGTTAAATA TCATACTCGT
TTATTAATGC GAGCTAAAGA ATGGGAAAAT AAACAATACA ATTCGGATTT TCTTTTATTA
GGAACCAATT TAGAAGAAGC AGAAAAATGG TTAGCTGAAA GTCAAGATAA ACAGCCTGAA
GCTACTGCAT TACAGCAAAA ATATATACAA ACTAGCCGAA TTATTGAAAC TGAACGAGAA
GCAGTTGAAT TAAGGCTACG TCGCATGACT CCTCAAGAGC TTCGTAATCG TCAAACAGTA
CTGAATAAAG TTAACAATTA TTGGATTAAA GGCGTTCTGG AAAATTCTAT TCATGAACAG
GCGTTGATAA TGTTAGAATT AGAAGAACAT TCTGACGCAG TAGCCTCTCC TTGGAATCTA
ACGTTACAAA CGTCTGAAAA AAAACCTAAA CAATTGTCTT TAGATACTTC TATTATCTCG
ATTTTCGATC AAATGGGAGA AGGCAGAACA TTGCTGATTC TAGGAGAACC AGGATCAGGC
AAAACGACAA CTTTATTACA ATTAACTCGT CACTTAATTA ACCGTGCTAA TGAAGGGATT
GATGACCGCA TTCCAGTAGT TCTTAATCTC TCTAATTGGT CAGTTGAAAA ACGTAATTTT
ACTGATTGGT TGGTGGAAGA ACTCAACAGC AAATATCAAG TCCCCAAGAA AGTTGGAAAA
ACTTGGGTTC AACAACAGCA ACTTCTTTTA CTTTTAGATG GGTTAGATGA AGTAACAGTT
AAGCATCGAG AAAAATGCTT ACAAACTATC AATCAATTTC ATCAAAACTA TAGTCCAGAA
ATTGTTGTTT GTAGCCGTTT TAAAGAGTAT AAAGAACTTT CTTCTCGTTT AAACTTTCAA
AAGGCAATTT ATTTAAAACC TCTACAGTTA ACGCAGGTTT TGGATTACTT AAAAAGTGAT
CAAATCAAAC AGTCTAATTT AGTGACTTTA ATTGATAGAG ATAAAACTCT ACAAGAATTA
GTAACCTCTC CCTTAATGCT GAATCTTATG ATTTTGGCTT ATCAAGATCT ATCTTTTCAA
GCGTTACCGC AAACAAACAT AATAGAAGAA CGTCGTCAGC AACTCTTTGA TAGATATATT
GAGCAAATGT TTAAACGGCG AGAAATTCAA CCCAAATATT CTAAAGAACA AGTTATCCAT
TGGCTGAATT GGTTAGCAAG ACGAATGACT AACTTTTCGA CAACGGTATT TTTAATAGAA
GAAATGCAGC CGAACTGGCT ATTAACTAAC CGACAAAAAT ATCTATATCG CCTGGTAATT
AAAATACTTA GTGTAGGAAT TTGGGCAAGT TTTCATGTAG GGTTATTAAC GGGACATCAA
GGCTATCAAA TTACTTTAAA TATTGATCAA GCGTTTAGGG GAATGACCTA TGGTTTGATG
GGAGCTTTCT TATATGCTTT ATTAACAATC ATGATTGATG AATCAATTAA TCCTGTTATT
GGACGTTTAT TTAATTCTCT TATTTTAGGT ATAATTTACG GATTAATTTT TAGTGTAATT
TATGGTAATT GGATCTATGG CATAGCCTAT GGCATAATAT ATGGACTCAT TGGATTATTA
ATTTATCGAC CAATTTATAG CGAAAAAATA GAAGCAGTTG AAGGACTAAA ATGGTCTTGG
GTTAAAGCTA AAAACAATTT AATCTTTGGT TTGATTATAG GAATTTGCCT CCGGTTTGGA
ACTTCTAATG AATTGCTTCC TAGCCTTATT TTTGGATTAA TAATATCATT GATTTTTGGA
TTTGACAAAG ATGATGAAGT TGATCAAAAA AATATGCCAA ACCAGGGAAT CTGGAGATCT
TGTCATAATA GCGCAAAATT GTTTGCGACG ATCGCTATCC TAACTGGACT ATTTTTAGGG
GTATTTCAGA TTCATTCAAA GATGAATGAT CCTGCATTTA TCATTGATTT AGATTTTGTA
GTAGTTAATG CTTTCATTTT TGGGTTAGCT GCTGCCTTAA TTGGGGGACA ATGGTCAGGA
ATCACCTGTA TTAAACATTT TACCTTGCGT TTAGTGCTTG GGGTTAATGG ATACAGTCCT
TGGAACTATG CAAAATTTTT AAGCTATACT GTTGAACACA TTTTTTTACA AAAAGTTGGT
AATGGTTATG TCTTTGTTCA TCGACTATTA CTTGACTATT TTGCTAAACG ATATGATCAA
TAA
 
Protein sequence
MTFDAIVKSN LPKSRPDYDV FISYSRRDKE FVRLLWEKLL EANYTVWVDW QDIPPAEDWR 
QEIYQGIEAS HNFLFIISSH SLTSVFCQEE LTYAINHNKR LIAIIIQEPQ NEDINPDLAK
INWIFCSGCN GEECDNFKQS FQQLLQALET DFNYVKYHTR LLMRAKEWEN KQYNSDFLLL
GTNLEEAEKW LAESQDKQPE ATALQQKYIQ TSRIIETERE AVELRLRRMT PQELRNRQTV
LNKVNNYWIK GVLENSIHEQ ALIMLELEEH SDAVASPWNL TLQTSEKKPK QLSLDTSIIS
IFDQMGEGRT LLILGEPGSG KTTTLLQLTR HLINRANEGI DDRIPVVLNL SNWSVEKRNF
TDWLVEELNS KYQVPKKVGK TWVQQQQLLL LLDGLDEVTV KHREKCLQTI NQFHQNYSPE
IVVCSRFKEY KELSSRLNFQ KAIYLKPLQL TQVLDYLKSD QIKQSNLVTL IDRDKTLQEL
VTSPLMLNLM ILAYQDLSFQ ALPQTNIIEE RRQQLFDRYI EQMFKRREIQ PKYSKEQVIH
WLNWLARRMT NFSTTVFLIE EMQPNWLLTN RQKYLYRLVI KILSVGIWAS FHVGLLTGHQ
GYQITLNIDQ AFRGMTYGLM GAFLYALLTI MIDESINPVI GRLFNSLILG IIYGLIFSVI
YGNWIYGIAY GIIYGLIGLL IYRPIYSEKI EAVEGLKWSW VKAKNNLIFG LIIGICLRFG
TSNELLPSLI FGLIISLIFG FDKDDEVDQK NMPNQGIWRS CHNSAKLFAT IAILTGLFLG
VFQIHSKMND PAFIIDLDFV VVNAFIFGLA AALIGGQWSG ITCIKHFTLR LVLGVNGYSP
WNYAKFLSYT VEHIFLQKVG NGYVFVHRLL LDYFAKRYDQ