Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3286 |
Symbol | |
ID | 8392622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3356578 |
End bp | 3358368 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644981230 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_003138956 |
Protein GI | 257061068 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0460784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTG TCAAACAGAT GGATAAATGG AATACTTGGA AGGACATCAA CTGGAAAGTT GTTGAACGTC AGGTATTCAA GCTCCAAACG AGAATTTACA AAGCGAGTCA GAGTGGTAAT GTCAAGTTAG TCCACAAACT ACAACGGTTG CTCACAAAAT CCTATTATGG CAAGCTTTAC GCGGTCAGAA AGGTAACTCA AGATAACCAA GGAAAGAAAA CCGCAGGAGT AGATGGGGTC AAATCCCTGA CACAAAAGCA ACGAATGGAA TTGGTTGAAA ACTTAACCCT AAAAGGTAAA GCTAAACCTA CCCGCAGGGT ATGGATACCT AAACCTAATG GAGAAAAAAG ACCTCTTGGG ATACCAACCA TAACCGATAG AGCAAAGCAA TATCTAGTTA AATTAGCACT AGAACCACAA TGGGAAGCCA AATTTGAGCA TAATAGCTAT GGTTTCAGAC CAGGACGGTC TTGTCATGAC GCTATAGAGG CAATCTATAT CGCAATTAGC CGAAAAGCCA AATTCGTATT GGATGCCGAT ATTGCAAAAT GCTTTGACAA AATCAATCAT GAGAAATTGC TCACAAAGTT GGAAACCTAT CCAGAAATAA GAAAGTCAAT TAAAGGCTGG CTTAAGAGTG GATTTAGGGA TGATAAGGAA TGGTTTCCCA CTGATGAAGG AACACCACAA GGAGGAGTAA TATCCCCCCT ATTGGCAAAT ATCGCCCTTC ATGGGATGGA AACAATCATT AAAGACTTTG CCAGAACATG GAAAGGTGAA AAAGCAAAGA ATGAACAAAG TATCTCAGTA ATAAGATATG CTGATGATTT TGTCATCCTT CACGAAAACC TTGACATCAT ACAAAAATGC AAAAGTATCA TTGAAAACTG GTTAAGTGAA ATTGGATTAG AACTCAAGCC AAGTAAAACC CGTATTTCCC ATACCTTACA AGAGGTAGAA GGAAAAATTG GGTTCAACTT CCTAGGGTTC CACATCCAAC AACACAAGGT TGGAAGAACT CACACTGGAA CGAGTACCAA TGGGAAACCA TTAGGATACA AAGCAATCTT CAGACCATCA GGAGAAAAAG TCAAGCAGCA CATCAAAAAA GTTGGAGACA TCATCAGAAA GCATAGAGCA TCTCCTCAAT CAGCCCTAAT TAAAGAATTA AATCCGATAA TTAGAGGATG GTCAAATTAC TACAGCACAG TAGTTAGTAA GGAAGTATAT TCAAAATGTG ACTATATGAT GTATTCACAA CTAAAAAGGT GGGCAGAAAG ACGACACCCC AACAAATCAA ATTCATGGGT AGCCAAGAAA TATTGGCATA CTCACGAATT AAGAAGATGG GTTTTCTCAA CGAATGAAGG TCTCCAACTG ATTCAACATA GCGACACGAG AATCAAAAGG CACACCAAAG TGAAGGGCGA GAAATCACCC TTTGATGGAA ACTGGGTATA TTGGTCAACC AGATTAGGGA AACACCCTGA AGTTTCTACC AGAATGGCAA CATTACTCAA GAAACAAAAA GGGAAATGCA ATCACTGTGG ACTATACTTC AAAGATGGTG ACTTGTTAGA AACCGACCAT ATCACCCCTA AATCACAAGG TGGAAAGGGA AAGTATGAAA ATCTACAGGT ACTACATCGA CATTGCCACG ATGAGAAGAC TTCTAGAGAT GGAAGTCTAA ATCGTACCCA TAACAAGGGG TCTGTTGGAG AGGAGCCGTA TGAAGCGAAA GTTTCATGTA CGGTTCTGAA GACGAGTCAG AGTCGTGAGA CTCTGGCTTA G
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Protein sequence | MTTVKQMDKW NTWKDINWKV VERQVFKLQT RIYKASQSGN VKLVHKLQRL LTKSYYGKLY AVRKVTQDNQ GKKTAGVDGV KSLTQKQRME LVENLTLKGK AKPTRRVWIP KPNGEKRPLG IPTITDRAKQ YLVKLALEPQ WEAKFEHNSY GFRPGRSCHD AIEAIYIAIS RKAKFVLDAD IAKCFDKINH EKLLTKLETY PEIRKSIKGW LKSGFRDDKE WFPTDEGTPQ GGVISPLLAN IALHGMETII KDFARTWKGE KAKNEQSISV IRYADDFVIL HENLDIIQKC KSIIENWLSE IGLELKPSKT RISHTLQEVE GKIGFNFLGF HIQQHKVGRT HTGTSTNGKP LGYKAIFRPS GEKVKQHIKK VGDIIRKHRA SPQSALIKEL NPIIRGWSNY YSTVVSKEVY SKCDYMMYSQ LKRWAERRHP NKSNSWVAKK YWHTHELRRW VFSTNEGLQL IQHSDTRIKR HTKVKGEKSP FDGNWVYWST RLGKHPEVST RMATLLKKQK GKCNHCGLYF KDGDLLETDH ITPKSQGGKG KYENLQVLHR HCHDEKTSRD GSLNRTHNKG SVGEEPYEAK VSCTVLKTSQ SRETLA
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