| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3284 |
|---|
| Symbol | |
|---|
| ID | 8392620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3354400 |
|---|
| End bp | 3354969 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644981228 |
|---|
| Product | protein of unknown function DUF820 |
|---|
| Protein accession | YP_003138954 |
|---|
| Protein GI | 257061066 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000638939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTA TCACTCTCAA TGTTCAACCG TTTCAAATGA CTGATGAAGA ATTTTATCAA
CTTTGTCAAG TTAATGAAGC CTGGCGATTA GAAGTAACCG CTAAAGGAGA CTTATTAATT
ATGCCACCAG TAGGGGGAAA AAGTGGTCGT CGAGAAGCCA GCTTAATTAG TCAAGTATGG
TTATGGAATG AACAAACTCA ATTAGGAATT GTCTTTAGTT CTTCAACAGT TTTTTGTTTA
CCAAATGGAG GAAAACGTTC CCCTGATGTA GCATGGGTTA AATTAGACAG ATGGCAAGGT
TTAACCGAAC AAGAACAAGA GAAATTTCCG CCTTTATGTC CTGATTTTGT CATCGAATTG
CGTTCTAAAA CCGATAATTT AGAAGACTTA CAAGAGAAAA TGGCAGAATA CCTTGATGCT
GGATTACGCT TAGGATGGTT AATTAATCCA CAACACCAAC AAGTCGAAAT TTATCGACCT
AATCACAATA CAGAAATTGT CTCCCTTCCA ACTTGTTTAT CAGGAGAAAA TGTGTTAAAT
AATTTTGTTT TAGATATTCC TCTTCTGTAA
|
|---|
| Protein sequence | MSTITLNVQP FQMTDEEFYQ LCQVNEAWRL EVTAKGDLLI MPPVGGKSGR REASLISQVW
LWNEQTQLGI VFSSSTVFCL PNGGKRSPDV AWVKLDRWQG LTEQEQEKFP PLCPDFVIEL
RSKTDNLEDL QEKMAEYLDA GLRLGWLINP QHQQVEIYRP NHNTEIVSLP TCLSGENVLN
NFVLDIPLL
|
|---|
| |