| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3219 |
|---|
| Symbol | |
|---|
| ID | 8392555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3293233 |
|---|
| End bp | 3294441 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644981166 |
|---|
| Product | HtrA2 peptidase |
|---|
| Protein accession | YP_003138892 |
|---|
| Protein GI | 257061004 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.228684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT CTCTGAAACA AGTAGGTGTA TATCTGGGAA TACTAGCAGT CGGTGGCGGT
GTAGGCTTAT GGGGAAGTCG CTACTTAAAT CAATCATCAG TACCTGAGAC GGTTCAACAG
CCTGCCGCGG TTCCCACCAC CTTAAAACCC TTTTCTTTGC CTAATCCAAC CTCTAAACCT
GATGATCTTA ATTTTATTGC CAAAGCTGCC CAAAAAGTTG GTCCAGCAGT GGTGCGCATT
GATGCAGCCC GTGAGGTCGC CAATCAAGAA TCAGAATCGT TCGAGAGTCC TTTTTTCCGT
CGTTTCTTCG GTAATGGTCA TCCCATCCCT CTCCCGAAAG AACATATTGA ACGGGGAACG
GGGTCAGGTT TTATTCTCAC AGAAGATGGA CAATTATTAA CCAATGCCCA TGTTGTCGAA
GGGACTAAAC AGGTCAAAGT GACCCTTAAG GATGGTCAAG TCTATCAAGG AGAGGTTATT
GGGGTTGATC AGATGACCGA TGTAGCTGTG GTTAAAATTG AGGGGAAGAA TCTGCCGACG
GTTCAACTAG GGGCAGCCGA AACGCTACAA CCCGGAGAAT GGGCGATCGC CATTGGGAAT
CCTTTGGGGT TAGATAATAC AGTCACCGTA GGCATTATTA GTGCGTTAGG GCGATCGAGT
TCGGAGGTGG GAGTTCCCGA TAAACGGGTC AGATTTATTC AAACCGATGC TGCAATTAAT
CCGGGTAATT CAGGCGGTCC TTTGCTTAAT TCTGATGGCG AAGTGGTGGG CATTAATACA
GCCATTCGTC CTGATGCCCA AGGGTTGGGG TTTGCCATTC CCATTGAAAC AGCCCAACGG
GTGGCGCAGG AATTATTTGT TAAGGGAAAA GTGGATCATC CCTATTTGGG GATTCACATG
GTTACATTAA ATTCGGATTT ACAAAAACAA CTTAATCAAG ACAATGAATT AAATTTTAAA
GTCACTAAAG ATCAAGGAGT GTTAGTTATT CGAGTGGTTA ATGATTCTCC GGCCGCTAAG
GCAGGATTTC AACCCGGAGA TATTATTTTA AAGGTGGGAA ATCAACCGGT AGAAACCGCA
GCCGATGTCC AAGAACAGGT TGAAGCAAGT ACGATTGGTC AGGTTCTTCA GGTTGAAGTG
ATTCGTCAAG GGAATCCTAA GTCGATGCTT TTGTCAGTCC GTCCGGGATC TTTTCCCGCG
AATAATTAG
|
|---|
| Protein sequence | MTISLKQVGV YLGILAVGGG VGLWGSRYLN QSSVPETVQQ PAAVPTTLKP FSLPNPTSKP
DDLNFIAKAA QKVGPAVVRI DAAREVANQE SESFESPFFR RFFGNGHPIP LPKEHIERGT
GSGFILTEDG QLLTNAHVVE GTKQVKVTLK DGQVYQGEVI GVDQMTDVAV VKIEGKNLPT
VQLGAAETLQ PGEWAIAIGN PLGLDNTVTV GIISALGRSS SEVGVPDKRV RFIQTDAAIN
PGNSGGPLLN SDGEVVGINT AIRPDAQGLG FAIPIETAQR VAQELFVKGK VDHPYLGIHM
VTLNSDLQKQ LNQDNELNFK VTKDQGVLVI RVVNDSPAAK AGFQPGDIIL KVGNQPVETA
ADVQEQVEAS TIGQVLQVEV IRQGNPKSML LSVRPGSFPA NN
|
|---|
| |