| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3214 |
|---|
| Symbol | |
|---|
| ID | 8392549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3288213 |
|---|
| End bp | 3290162 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644981160 |
|---|
| Product | putative signal transduction protein with Nacht domain |
|---|
| Protein accession | YP_003138887 |
|---|
| Protein GI | 257060999 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5635] Predicted NTPase (NACHT family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.614434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTT TAGATATGAC TCAACCTATT GGGTTAGGGG ATATTTATAC CGATGTTAAT
ATCTTAGATA AAATGACGGG TTTGCGACGC TTTACCCTAG AGGAATTACA TTATATTTGT
CACTCGGATG GGAATATTTT TGATCGGTTG GGATGGGTAA AAGGAGAGGA AAGAATTGAA
GGGTTAGAAG CTGTTAGACG CTACAATAAA TTAATGATAT GGGGCAAACC AGGTGCAGGA
AAAACTACTT TTTTAAAATA TCTTGCGATC GCTTGTATTA AAAATCAGTT TGCATCAGAA
AAAGTTCCTA TTTTTGTGAC GCTTAAGCAA TTTGCCGAAA CAGAGAAGCA ACCTACTTTA
TTGACTTATA TTTTTGATCA ATTTAGAGAA GTTAACGTTA AAGAAGATGA AATTAAAAAT
ATTTTAGCTG AAGGGAGATG TCTTATTTTG CTCGATGGGT TAGATGAAGT TAGACCGGAA
CACAGTACCC GTATTATTAA TCAAATACAG CAGTTTGCTG ATCGAAATAA TTATAGAAAA
AATCAATTAA TTATTACCTG TCGTATTGCT GCCAAAGACT ATACTTTTCA GGGGTTTAAG
GAGGTAGAAG TCGCTGATTT TGATCGAGAA CAAATTGAAG AGTTTGTTAA TAAATGGTTT
CAGAAAAAAG ATCCAAGCAA AATAGAGAGG TTTATTAGTC GCTTAGAAGA TAATCAACCC
ATTGAAGAGT TGGCGACAAA TCCGTTATTA TTAACGTTGC TTTGTTTAGT ATTTGGAGAA
ATTGGAGATT TTCCAAGCAA CACAGGGGAA TTGTATCGGG AAGGAATTGA TATTTTATTG
AAAAAATGGG ACGCTAAATG CAACATTCAA CGCGAACAAG TCTATAAACA ACTATCCCCT
AACCGCAAGG AAGATTTATT AAGTTATATT GCTTTTAAGG GGTTTCAACA GGGGAATTAC
TTTTTTAAAC AAGTCAGTTT AGAACAATCT ATAGCAGACT ATATTGAAAA CCTCCCCGAT
GCCAAAAGTG ACCCCGAAGC ATTACGCTTA GACAGCGAAG CGGTTCTTAA ATCTATTGAA
GCACAACATG GGTTATTAGT GGCTAGGGCA AAACATATTT ATTCGTTTTC TCATCTAACT
TTTCAGGAGT ATTTTGCAGC AAGAAAAATA GCCATTAATC TTAATAATGA AGTATTAGAA
GAATTAGTCA GTCACCTAGT TCAATCCCGT TGGCGTGACA TTTTTCTATT AACAATGAAT
TTATTGGAAG ATGGCACAGA ATTAGTCAGA TTAATGAAGC AGTCTATTGA TAATTTAGTA
GCAAAAGATG ATAAAATACA ACAGGTTTTA AAATGGTTAC AAACTAAAGC CAATTCGGTT
GAGGTTACTT ATTCTCAAGA GGACTTTCAA GTAATAACTA AACGCTTAAA GTTTCCTGTT
TCCCAAGATG CAACCTTAAC CCGTGTTTTT TACCTTGACC TCTCCCTCTA CCTCTACCTC
GACCTCAACC CCCTCTACCT CTACCTATAC CTTGACCTCT ACCTCTACCT CGGCCTCGAC
CTCTACCTCT ATATATCTCT CTACCGCCCC CCCGACCTCA ACCTCTCCCT CGACCGTTCT
CTAGCGAAAA TTAATGACCC TATTTTCAAA CAAAAACTAC AAATTCTAAG AAATAAACTT
CCTGATATAG AAGACACAGA AAACTTTAAA CAATGGTGGA AAGTCAATGG CAAAAAATGG
ACAGAAGACT TAAGACAGTT AATGATTCAA TACCGAAATA TTGGTCATGA CTGGCAATTT
AGTCAAGAAC AAAAAGAGTT AATCAAACAA TATTATAAAG CAAATCAATT ATTAATGGAA
TGTCTTAATA GAGAGTGTGT TGTTGAGCGA AAAGTGAGAG TTAATATAGA AGAAACCTTA
TTTTTACCGA TATCACAAAT CAAAACGTAG
|
|---|
| Protein sequence | MQVLDMTQPI GLGDIYTDVN ILDKMTGLRR FTLEELHYIC HSDGNIFDRL GWVKGEERIE
GLEAVRRYNK LMIWGKPGAG KTTFLKYLAI ACIKNQFASE KVPIFVTLKQ FAETEKQPTL
LTYIFDQFRE VNVKEDEIKN ILAEGRCLIL LDGLDEVRPE HSTRIINQIQ QFADRNNYRK
NQLIITCRIA AKDYTFQGFK EVEVADFDRE QIEEFVNKWF QKKDPSKIER FISRLEDNQP
IEELATNPLL LTLLCLVFGE IGDFPSNTGE LYREGIDILL KKWDAKCNIQ REQVYKQLSP
NRKEDLLSYI AFKGFQQGNY FFKQVSLEQS IADYIENLPD AKSDPEALRL DSEAVLKSIE
AQHGLLVARA KHIYSFSHLT FQEYFAARKI AINLNNEVLE ELVSHLVQSR WRDIFLLTMN
LLEDGTELVR LMKQSIDNLV AKDDKIQQVL KWLQTKANSV EVTYSQEDFQ VITKRLKFPV
SQDATLTRVF YLDLSLYLYL DLNPLYLYLY LDLYLYLGLD LYLYISLYRP PDLNLSLDRS
LAKINDPIFK QKLQILRNKL PDIEDTENFK QWWKVNGKKW TEDLRQLMIQ YRNIGHDWQF
SQEQKELIKQ YYKANQLLME CLNRECVVER KVRVNIEETL FLPISQIKT
|
|---|
| |