Gene Cyan8802_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3172 
Symbol 
ID8392505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3245541 
End bp3246230 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID644981117 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_003138846 
Protein GI257060958 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT CGCGATCGCT CGATTATTCT ATTTACAACC AACGCTCATC CGAGATTTAC 
TCCATGAGTC AAAATGTTGT CCCCATGGTG GTAGAACAGT CTGGGGTAGG AGAAAGAGCA
TTTGATATCT ATTCGAGACT GCTACGGGAG CGGATTGTCT TTTTAGGAAC CCCCGTTGAC
GATCAAGTTG CGGATTCTAT TGTTGCCCAA TTACTCTTTC TCGACGCGGA AGACCCAGAA
AAAGACATTC AACTCTACAT TAACTCCCCA GGAGGCTCGG TTTACGCTGG CCTAGCCATC
TACGATACCA TGCAGCAAAT TCGCCCTGAC GTGGCAACTA TCTGTTTTGG CTTAGCTGCG
AGTATGGGAG CCTTTCTATT GTGCGGGGGA GCCCCCGGCA AACGGATGGC CTTACCGAGT
TCGCGCATTA TGATTCACCA ACCCCTCGGT GGAGCCCAAG GACAAGCCGT AGAAATTGAA
ATTCAAGCCA AAGAAATCCT CTATATCAAG CGGCGGTTAA ATGAAATGTT AGCCAGTCAT
ACAGGACAGC CTTTTGACAC CATTGCCGAG GATACGGAGC GAGACTTTTT TATGTCAGCC
CAAGAAGCCA AAGAATACGG TTTAATTGAT AAAGTTATTT CCCGACCTCA TTTGTCTGAT
TCCACCGTCC CAGTTACCTC ACTCAACTAA
 
Protein sequence
MIESRSLDYS IYNQRSSEIY SMSQNVVPMV VEQSGVGERA FDIYSRLLRE RIVFLGTPVD 
DQVADSIVAQ LLFLDAEDPE KDIQLYINSP GGSVYAGLAI YDTMQQIRPD VATICFGLAA
SMGAFLLCGG APGKRMALPS SRIMIHQPLG GAQGQAVEIE IQAKEILYIK RRLNEMLASH
TGQPFDTIAE DTERDFFMSA QEAKEYGLID KVISRPHLSD STVPVTSLN