| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3142 |
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| Symbol | |
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| ID | 8392474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | + |
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| Start bp | 3209615 |
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| End bp | 3212743 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644981087 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_003138817 |
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| Protein GI | 257060929 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.175068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.39911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG ACAAAACCCC TAAACCTATC AAGATGGATG AACGGAACTC TGTTGAAAAG
CCGATGCTTG ATCAACTGTA CGGTTTAGGG TGGGAAATAT TAGACTTAGA GAGAACCCAA
ACCCCTCAAC AAACCTTTAG GGAAAGCTTT ACCGAAGTGG TGATGCTGCC AATATTAAGG
GAACAACTAA AAGTTATTAA CCCTTGGATA GAAGATGATC AAATAGAAGA AACCGTTAAA
AACCTCACCG CTAACTTCCC CAGTACCAAC TTACTCGAAA ATAACCGCCA CATTTTTAAA
CTCCTACAAG AAAATAGCAG GGTCTCCGAA AACCGCAACA CAGCAGAAAA AAGCCCCACC
GTCCGCTTTA TCGACTTTGA AAAACCAGAA AATAACCGCT TTATTGCCGT CTGTCAGTTT
AAAGTCCGCA TTCTTGGCAC AGAAAACCAC ATCATCCCCG ATATTGTCCT CTTTTTAAAC
GGTTTACCCG TCGTCGTCAT CGAATGTAAG TCACCCAAAG TAAAAGAACC CATCCCCGAA
GCCATTGATC AACTATTGCG CTACAGTGAA CAACGAGGGG CAAAAGGAGA AGGAAGTCAA
CCCCTATTCT TTTATAACTA TTTTATCGTC GTAACCTGTC GCAACGAGGC AAAATTCGGC
ACTATTACCA CCCACACCGA AAAATACTTT TATCGTTGGG CTGATCCCTA TCCTCGTACC
TTAGATGACT TAGAACATGG TAGCAGTTCC CCCAACGATC AGCAGCGACT CGTAGCGGGA
ATGTTAGCCC CAGAGAACCT ATTAGAAATT ATCCGCAACT TTACCCTGTT TTCGGTTAAC
AACAAGGGAA AAACCATCAA AATAGTGGGA CGTTACCAAC AGTTTAGGGC CGTTAAAAAA
GCTGTTGAAC GACTTATAGA AGGGAAAACA CCAAGGGAAC GAAGCGGTAT TATTTGGCAT
ACCCAAGGCT CAGGTAAATC CCTTACTATG ATGTTTATGG TACGAGCCAT GTACCGCCAT
CCTAACCTCT GCCAGTGGAA AATCGTCTTT ATCACCGATC GCACCCAACT AGAACAGCAA
CTCGCCAAAA CAGGGCAGAA TGTGGGCTTT ACCGTCAAAC CTGCCGATAG TATCGCCAAA
TTAAAGGAAT TACTCCGCAG CGACTCCTCC GATCTCGTCA TGGCGATGAT CCACAAATTC
CAAGAACGAG ACTTGCAAGA AACCTTCCCA GAACTAAACC CCAGTAGTAA CATCTTGATC
ATGACCGATG AGGCACACCG ATCGCAATAT GCCTTACTAG GGGCCAACTT AGATAAAGCC
CTCCCCTACG CCTCTCGTAT TGGCTACACA GGAACCCCCA TTGATAAAAC CGAAAAAGTA
TTCGGGGACT ATATCGATAA GTACACCATG CGCCAGTCAA TTGAGGACGG AGTGACCCTA
GAAATCGTCT ATACAGGGCG AACTCACAAC GCAGAAGTAC CTGATAAGGA AGGGATGGAT
AAAGCCTTTG AGGACGTTTT TAGCGAGTAT AACCTATCAG AACGATTGCA GATTTTAGGC
TATGGTTCAC GGGATGCCTA CCTAGAAGCC CATTCCACCA TCGCAGCTAA AGCAAAAGAT
ATGGTACAGC ATTACCTGGA TCATATCTTT CCCAATGGAT ATAAAGCCCA AGTAGTGGCT
ACTTCCCGCG AGGCTGCGGT ACGGTACAAA CAACACATAG ACGAAGCGTT AGTAGAAGCG
ATCGCCCAAC TGCAACAGTC CAACCCCCAC GGGCTAAACC TGGATGTATT GAAGCAAGTT
AAAACCGATG TGATCATTTC TGGGGGACAT AACGACTTAC CCCACCTCAA AGCCTACAGT
AAGGATAGAC AACACGAAAC CACGATCAAA AGCTTTAAAC TGCCTTTTGA CGCAGAAGAT
GAAGGTATTA CGGGAGAGAT GGGTATTGTT ATCGTTAATA ATATGCTGCT GACGGGGTTT
GATGCCCCAG TAGAACAGGT GATGTATTTA GATAAGGTAA TTCAGTCCCA TAACCTTCTG
CAAGCGATCG CCCGTGTCAA CCGAGTAGGA GGAATAGATA AGGATAAGGG CTTTGTGGTG
GATTATGTGG GTATTGGACA CCACCTCAAG GATGCCATTG ATAATTACGA TGAACGGGAG
CAGAAAGAAA TTACAGAGGC TTTAAGCTTT CCAGAGGAAG AAATTCGCCA ATTAGAAGAT
GATTATCGGA CTATTTTAAC CTTCTTAGCA GAATACGGAC TGACCGACTT GACGGATCAT
GATGCCTTTT TTGACCTGTT TTACGACGAA GATATTCGCT TTGAGTTCAT GTTAAAGTTT
AAAAACCTAA CCCGTAGCCT TAACCTGGTT TTTCCTGCAA AAGAAGCTTT AACCTACATC
AAAGACTACC AAGCACTCAC CGAAGTGAAT GTATTAGCGG GTAAGCACTT CCGCGATGAA
CGTCTGAGCA TGAAAGGGAT TCCTGCTAAA TTGCGAACCT TAACCGATGA ATACCTTAAA
TCAAGGGGAA TTGAGGAAAA AATTAAACCC ATTTCTATCT TAGACGAACA CTTTGCCAAT
GAGGTTAAAA AACACAACCG CGTTAAAACC AAGGCGGCTG AAATAGAACA CGCCCTACGT
CACCATATTG ACATTGAGCT AGACGATGAT CCAGAACTGC AAGCCTCCTT CTCAGAAGCC
CTTAGAGCAA TTCTAGAGGC GTTTAGGGAC AACTGGCAGA AAATTTATGA GGAACTCGAA
AAGCTCCGTC AGAAGGTAAG AGAAGCGCAA AATGAGCCTA CCTACGGACT CCATAAGAAA
AAACAAATGC CCTTCTTTCG GATGTTCAAA CGGGAGTGTT TTGCAGACAT GGAGTTAGAT
GATCAGGCGA TCGCTCAAAT AGTAGCCTTA ACCCAAGAAG TTTTTACAGT AGTAGAAAGA
GAGTTACAAT TAACAGGGTT TTGGGAGAGC ATTCCAGCCA GGAAAAAACT AGAGGCCGAG
ATTCAAAAAG TGTTACTTTC CCCCGAATTT ATCAAAATAT CCAATCTAGT TAACAATCGC
AAGCCGATCA TCTCACGGGT GATAGAAATA GCCGAGAAAA ATAACGACCG AATTTTGTAT
GCTGAATAG
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| Protein sequence | MKTDKTPKPI KMDERNSVEK PMLDQLYGLG WEILDLERTQ TPQQTFRESF TEVVMLPILR
EQLKVINPWI EDDQIEETVK NLTANFPSTN LLENNRHIFK LLQENSRVSE NRNTAEKSPT
VRFIDFEKPE NNRFIAVCQF KVRILGTENH IIPDIVLFLN GLPVVVIECK SPKVKEPIPE
AIDQLLRYSE QRGAKGEGSQ PLFFYNYFIV VTCRNEAKFG TITTHTEKYF YRWADPYPRT
LDDLEHGSSS PNDQQRLVAG MLAPENLLEI IRNFTLFSVN NKGKTIKIVG RYQQFRAVKK
AVERLIEGKT PRERSGIIWH TQGSGKSLTM MFMVRAMYRH PNLCQWKIVF ITDRTQLEQQ
LAKTGQNVGF TVKPADSIAK LKELLRSDSS DLVMAMIHKF QERDLQETFP ELNPSSNILI
MTDEAHRSQY ALLGANLDKA LPYASRIGYT GTPIDKTEKV FGDYIDKYTM RQSIEDGVTL
EIVYTGRTHN AEVPDKEGMD KAFEDVFSEY NLSERLQILG YGSRDAYLEA HSTIAAKAKD
MVQHYLDHIF PNGYKAQVVA TSREAAVRYK QHIDEALVEA IAQLQQSNPH GLNLDVLKQV
KTDVIISGGH NDLPHLKAYS KDRQHETTIK SFKLPFDAED EGITGEMGIV IVNNMLLTGF
DAPVEQVMYL DKVIQSHNLL QAIARVNRVG GIDKDKGFVV DYVGIGHHLK DAIDNYDERE
QKEITEALSF PEEEIRQLED DYRTILTFLA EYGLTDLTDH DAFFDLFYDE DIRFEFMLKF
KNLTRSLNLV FPAKEALTYI KDYQALTEVN VLAGKHFRDE RLSMKGIPAK LRTLTDEYLK
SRGIEEKIKP ISILDEHFAN EVKKHNRVKT KAAEIEHALR HHIDIELDDD PELQASFSEA
LRAILEAFRD NWQKIYEELE KLRQKVREAQ NEPTYGLHKK KQMPFFRMFK RECFADMELD
DQAIAQIVAL TQEVFTVVER ELQLTGFWES IPARKKLEAE IQKVLLSPEF IKISNLVNNR
KPIISRVIEI AEKNNDRILY AE
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