| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3068 |
|---|
| Symbol | |
|---|
| ID | 8392398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3103563 |
|---|
| End bp | 3104867 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644981017 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003138749 |
|---|
| Protein GI | 257060861 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.55142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.39672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCTT TTGCACCCAA CTTTTTAACC CCTAGCCAAG ATTTTGTGAC CCTGTGTCAA
TCACAAGTCA CCCTCTTGAC GCAAGGATTA AAAGCCGACT GGAGTGCCAT TTATCTAGCG
CAAGAAAGTG AAGCTGGACA ACAGACAGAT TTAATTCCTC TGGTCTTTTA TCCCACCAAG
GAGGATATCT GGTCAAGTAA AAATCTTAAT AGTTTAGCTT TACCGAATAG TTCAGAACCG
CTTAATAAGT TACCTCGGTT ACTTCTGGGT AAATCTTCTA CCGTTGACCC CAATGGTGAG
CAAGCTATCC TTGATAGTAG TCGTCGGTTT TCTCAAGATC CCTATCGATT GGTTTTGCCT
TTGATACACA CAGAAATCAT GGTAGGATTG TTAGTAACTG AGCGTAAAAA TTGTCCTTGG
CAACCTGAAG AGTTAACCCA AGTGGAAACG ATTGCTAAAA CCTTAGCGAT CGCGGGTTTA
TTAGATCGTC GTCAAAATTG GTATCAAGAA CAATTACGTC AGCAACAGGG TTTAAAAGTT
CAAGAACGCG ATCGCTTAGA CGATCTTTTT CATCAATTGC GGAACCCTCT AACGGCGTTA
CGAATTTTTA GTAAATTGCT TTTAAAACGT CTTAAGTCAG ATGAAAAAAG TCGATCAATT
GTTGATAGTA TTATCCGAGA AAGTGACCAT TTACAAGAGT TAATTCAAGC CTTTGAAGGG
GATCAAGATA CCGTTACTCT CAATGCTAAA GCTAGTCTTT CTTGTGCTTC TTTACCTTCG
GCAACATCCC GAACATTATC TCCCGTTAAT ATTAAAGACG TTTTAGACCC TTTATTAATC
TCTATAAAAT CCATTGCCCA AGAGAAACAA ATTGATTTAA AAGCCGATAT TCCTAGGGAT
TTACCGTCTG TTTATGCCAA TAGTCAAGCC TTACGAGAAG TATTAAATAA TTTGATTGAT
AATGCTATAA AATATACTCC AAAAGGAGGA CAAGTTAGAG TCGAATTAGG CTTAATTTCA
ATCATTGATC AGAAGACTTA TCAAGGAATT TTGATTGAGG ATACGGGATA TGGTATTCCC
TTAGAAGATC AAGCACATAT TTTTGATCGT CATTATCGCG GCATTCAAGC AGAAGGAGAT
ATTTCTGGAA CGGGTTTAGG GTTAGCTATT GTTAAAGATC TTGTTAATCA AATGGAGGGT
ATAATAGAAG TCTTTAGTCC AATTAATGCT AAACAAAAAA AAGGAACACG GTTTATGGTT
TGGTTGCCGT TGTCTCAGGA GGGAATGCAG GGTAAGCTCA TCTAA
|
|---|
| Protein sequence | MSSFAPNFLT PSQDFVTLCQ SQVTLLTQGL KADWSAIYLA QESEAGQQTD LIPLVFYPTK
EDIWSSKNLN SLALPNSSEP LNKLPRLLLG KSSTVDPNGE QAILDSSRRF SQDPYRLVLP
LIHTEIMVGL LVTERKNCPW QPEELTQVET IAKTLAIAGL LDRRQNWYQE QLRQQQGLKV
QERDRLDDLF HQLRNPLTAL RIFSKLLLKR LKSDEKSRSI VDSIIRESDH LQELIQAFEG
DQDTVTLNAK ASLSCASLPS ATSRTLSPVN IKDVLDPLLI SIKSIAQEKQ IDLKADIPRD
LPSVYANSQA LREVLNNLID NAIKYTPKGG QVRVELGLIS IIDQKTYQGI LIEDTGYGIP
LEDQAHIFDR HYRGIQAEGD ISGTGLGLAI VKDLVNQMEG IIEVFSPINA KQKKGTRFMV
WLPLSQEGMQ GKLI
|
|---|
| |