Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_3009 |
Symbol | |
ID | 8392337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 3041475 |
End bp | 3044501 |
Gene Length | 3027 bp |
Protein Length | 1008 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644980956 |
Product | exonuclease SbcC |
Protein accession | YP_003138690 |
Protein GI | 257060802 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.291694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCCC TTGAGCTTAC TCTAAAAAAT TTTCTGAGTT ATCAACAGGC TACCCTAAAT TTTCGGGGGT TACATACAGC TTGTATTTGT GGGGCTAATG GGGCAGGGAA ATCTTCCCTA CTCGAAGCGA TTACTTGGGT AATTTGGGGA AAAAGTCGGG CGGCAAGTGA TGATGATGTT ATTCATGGAG GATGCGACGA TGTTCGTGTC GATTTCCAAT TTATTAGTAA TCAAGAAGTT TATCGTATCA TTCGTAATCG TCGTCGAGGA GGCAATAGTA ACCTAGAATT TCAGATAGAA AGTGCTGGAG AATTTCGGAC ACTTTCGGGT AAAGGAATAC GAGATACCCA AAAAAAAATT ATTACTTATT TGAAACTCGA TTATGATACC TTTGTTAATT CAGCTTATTT ACGTCAAGGA AGGGCTGATG AATTTATGTT GCATCCTGCG ACAGAGAGAA AACAAATTTT AGCTGATTTA TTAAAACTTG ATCAATATCA AGAATTAGCT GATCAAGCTA AAGATTTATC CAAGCAGTAT CAAGGACAAG CTAATCAAAT TGAGTTAAGT TTAGTGCCTA TAAAAGAGAA GTTAAGCCAA GAAAAAGATC TCAAAGAAAA ACAGAAAAAT TTAGTTCAAA ACTTAGAAAC ACTGCAACTT CTTCAAGAAC AAGAGAGAAG AGAATTACAG CAACTTCAAC AAGAAGAAAA TGAACGTAAA ACATTATCAG AGCAGTTTAG TTGGCAACAA CATCGATATC AAGCTCTTAT CAAAGATGAG GAAAGATTAA CCCAAGAAAA AGAAGAAATT AATTATCAAA TAAAAAACCT TAAAAAGATT ATTGAGCAAG AGGATAAAAT CCTGCAACGT TATCAACAAG CTATGCAATT TCAAGAAGAG GAAAAACGCT TAGCAACTCA ATTTAAAGTT TATCAAGAAC AGCAACGAGA AAAACAACAA TTAGAACAAC AACTGAGTCA AGAAACTAAT CAAATCAACT TACAAATTCA TCAAGTAAAA ACTCAGTTAG AAAGCTTAGA CCAACAAGAA AAAGAATTAA CTCAGATTCT CAATAATTCT CAAGACGTTA AAGTTGCTTT AGAACGACTG TCTCATCATC GTGAAAGGTT ACAGCATTTA GATAAATTAC AGCATCAAGT AGCACCTCTT TTACAAAGAA AATATAGTCT ACAAACAAAG ATTGAACAGT CTAAGGCTAA TTTGAAAGCG CAATTAGAGC AACTTTATCT GAATGAAAAA TATTATTTAC AACAAATTGA CAAAATTCCA GAAGTACGAC AATCTCTTTT AGAGATTGAT CTCAAATTAC AAGAACTTGA CAAGAAACAA GTTTATCAAA AAAGAGTCGA AGAAAAAGGA CAAGAAAGAA ATGAATTTCA AGAACGTCTT AAAGAAAATC AGCGACTGTC GGAAGAAAAA ATTGAGGAAT TGCAAGAAAA ATTAAAAAAG TTAGAAATTC CTGAGGCAAT TTGTCCTTTA TGTGAACAAG ACTTAGATGA AACCCATCGT CATCATGTGA TTACTAAAAC CCAAAGACAA CAACAAGAAA CTCAAGAAAA AATTTGGATA TTGCAAGAAC AAATGTCCGT GGTAAAACAG GAGTTAAAAA TACTACGAGA AGAGTATAAG TTATTAAACC AAGAGTTATC TATTAAAGCA TCTTTAGAGC AAGAATACGG ACAAATAGAA GCTGAATTAG AAAATAGTGG TAAAATTAGT TTTCAGCTTA AGGAAACTAC CAAAAAAATA AAAGAAATTG AGCAATTATT AACAGCAGAA ACTTACGCAA TTGAATTACA GTCGGAATTA ACTAGCCTCA ATGAAGAATT GCAAAAACTC AATTATGATG AACAAACCCA TGCTTTAGTC AGAGGAGAAG TTGAACGCTT TCGTTGGGCA GAAATTAAAC AAGCTAAACT CGATGAAGCT AGTCGCCGGA AATCAGTTAT TTTACAACAA AAACCAACTT TAATAGAAAA AATTAATAAT TTAACACAAC AAAAAGAAAA CTTACAAAAT CAATCAGATA TTAAAGTAAA AATTAATTCG TTAGAAGCAT CTATTAACCA ATTAGGTTAT CAAAGTTCTG AACATCAAAA ATTATTAGAT GCTTTGCGAC AGTCTCAATC TTGGCAATTG CAATATCAAC AATTACAGCA AGCAAAACAA CAATATCCCC AATTACAAGA ACGTTATCAA ACCATAGAAA TTAGATTACA ATCTCAGCAA CAAGAGAAAG AAAAAATCCA AAAAGAAATC AATCAATCGT CTGTTAAAAT AGATCTGAAC AGCAATAAAC AGCAACAAAT TGATAACTTA GAAAAACAGA TTCAAAATCG CAGACAAAAG TTAGATGAAT TATTAGCTCA AAAAGGAAGA TTAGAACAAT CTATTTTACA ATTAGAAAGT CTTAAAAAAC AAAGCGAAAT TGATAAAAAT CACCTCAAAG AAATCCGTAA AAAATATCGA GTTTATCAAG AGTTAGCCAA AGCTTTTGGT AAAAATGGTA TTCAAGCTTT GATGATAGAG AATGTTTTAC CTCAATTAGA AGCAGAAACT AATCAAATTC TGGCACGGTT AACAGCGAAT CAATTACATA TTAAATTTGT GACTCAAAAA GCAGGACGTA GTGGTAATTC TCGACAAAAA TCAGCTAAAC TCATTGATAC TTTAGATATC TTAATTGCTG ATGCTAATAT GACAAGATCC TACGAAACCT ATTCAGGAGG AGAAGCTTTC CGTATTAATT TTTCGATTCG TTTAGCATTG GCAAAACTAT TAGCACAACG CGCCGGAACA TCGTTACAAA TGTTAATTGT TGATGAAGGA TTTGGAACCC AAGATACAGA AGGATGTGAT CGTTTAATTG CTGCTATTAA TGCTATTTCT TCTGACTTTT CTTGTATTTT AGCCGTCACC CATATGCCTC AATTTAAAGA AGCTTTTCAG TATCGTATTG AAGTCAAAAA AAATTATAAT GGTTCCCAAA TACACTTAGT GAGTTAA
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Protein sequence | MIPLELTLKN FLSYQQATLN FRGLHTACIC GANGAGKSSL LEAITWVIWG KSRAASDDDV IHGGCDDVRV DFQFISNQEV YRIIRNRRRG GNSNLEFQIE SAGEFRTLSG KGIRDTQKKI ITYLKLDYDT FVNSAYLRQG RADEFMLHPA TERKQILADL LKLDQYQELA DQAKDLSKQY QGQANQIELS LVPIKEKLSQ EKDLKEKQKN LVQNLETLQL LQEQERRELQ QLQQEENERK TLSEQFSWQQ HRYQALIKDE ERLTQEKEEI NYQIKNLKKI IEQEDKILQR YQQAMQFQEE EKRLATQFKV YQEQQREKQQ LEQQLSQETN QINLQIHQVK TQLESLDQQE KELTQILNNS QDVKVALERL SHHRERLQHL DKLQHQVAPL LQRKYSLQTK IEQSKANLKA QLEQLYLNEK YYLQQIDKIP EVRQSLLEID LKLQELDKKQ VYQKRVEEKG QERNEFQERL KENQRLSEEK IEELQEKLKK LEIPEAICPL CEQDLDETHR HHVITKTQRQ QQETQEKIWI LQEQMSVVKQ ELKILREEYK LLNQELSIKA SLEQEYGQIE AELENSGKIS FQLKETTKKI KEIEQLLTAE TYAIELQSEL TSLNEELQKL NYDEQTHALV RGEVERFRWA EIKQAKLDEA SRRKSVILQQ KPTLIEKINN LTQQKENLQN QSDIKVKINS LEASINQLGY QSSEHQKLLD ALRQSQSWQL QYQQLQQAKQ QYPQLQERYQ TIEIRLQSQQ QEKEKIQKEI NQSSVKIDLN SNKQQQIDNL EKQIQNRRQK LDELLAQKGR LEQSILQLES LKKQSEIDKN HLKEIRKKYR VYQELAKAFG KNGIQALMIE NVLPQLEAET NQILARLTAN QLHIKFVTQK AGRSGNSRQK SAKLIDTLDI LIADANMTRS YETYSGGEAF RINFSIRLAL AKLLAQRAGT SLQMLIVDEG FGTQDTEGCD RLIAAINAIS SDFSCILAVT HMPQFKEAFQ YRIEVKKNYN GSQIHLVS
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