Gene Cyan8802_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2953 
Symbol 
ID8392281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2987778 
End bp2988590 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID644980902 
ProductTPR repeat-containing protein 
Protein accessionYP_003138636 
Protein GI257060748 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.162734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGTC TATTCGTCAC CTTACTTACT ATTCTTTGGC TTGGATTTGC AACCATTCCC 
ACCGCCTTAG CCCAAGATAC CAGCATTTTG TCTATTACAG AAGAACAACT ACAACAGGGA
GAAGAAATCG CTAAAAAAGC AATTGAAGCG ACAGAAAAAG GGAATTTTAG CCAAGCAGAA
GCCTATTGGA GTCAATTAAT CGAACAATTT CCCAGTAATC CGGCAGTTTG GAGTAATCGA
GGCAATAGTC GGGTGAGTCA AAATAAATTA GACGAAGCGA TCGCCGACTT TAATCAAGCT
ATTACTTTAG CACCCAATGA ACCCGATCCC TATCTTAATC GAGGAGCCGC CTTAGAAGGC
CAAGGAAAAT ATCAAGAAGC GATCACCGAT TACAATCATG TCCTAGAATT AGATCCCCAT
GATGCCATGG CCTACAATAA CCGAGGCAAT GCAGAAGGGG GGTTAGGACA ATGGGAAAAA
GCCCTAGAAG ATTATCAAAA AGCCGTAGAA ATTCAGCCTA ATTTTGCCTT TGCTAAAGCC
AACGTTGCCC TAGCTTCCTA TCAATTAGGA AACACCCAAG AAGCCTTAAA CCAGATGCGG
AAAATTGTGC GAAAATACCC CATGTTTCCT GATATGCGGG CAGCCTTAAC CGCCGTTTTG
TGGGAGTTAG GACAGCAAGG AGAAGCCGAA AGCAATTGGG TAGCAGCCGT AGGTATGGAT
AATCGTTATC AAGACTTAGA GTGGGTAAGC CATATTCGTC GCTGGCCGCC AGAAATGGTC
GTTGCTTTAG ATAACTTTTT AAATCTCAAA TAA
 
Protein sequence
MIRLFVTLLT ILWLGFATIP TALAQDTSIL SITEEQLQQG EEIAKKAIEA TEKGNFSQAE 
AYWSQLIEQF PSNPAVWSNR GNSRVSQNKL DEAIADFNQA ITLAPNEPDP YLNRGAALEG
QGKYQEAITD YNHVLELDPH DAMAYNNRGN AEGGLGQWEK ALEDYQKAVE IQPNFAFAKA
NVALASYQLG NTQEALNQMR KIVRKYPMFP DMRAALTAVL WELGQQGEAE SNWVAAVGMD
NRYQDLEWVS HIRRWPPEMV VALDNFLNLK