Gene Cyan8802_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_2860 
Symbol 
ID8392187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp2888477 
End bp2889157 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content46% 
IMG OID644980810 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003138545 
Protein GI257060657 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0070189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000343254 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACAGA CAACAACCGA TAAGACAAAT AACCGTAAAA ATCAATCTCC TGTTCATGCC 
CGTCCCTTAA AACTGTGGCA AGATCAATCC CATGAGAAGG AGGTTCATAT TGAAATTGTC
CCTTTGATTG ATGTGATTTT TTGTATCCTA ACGTTCTTTA TTTTGGGAGC CGTAGGACTA
TCCCGTCAGC AGGCTATTAG CTTAGATTTA CCGAAAGCGG GTACTGGAAC ACCTCAAATG
AGGGAGATGC TGGTGGTCAG TCTTGATGAT TTTGGTCAAG TCTATTTAGA AAAACAACCA
GTGACCCGTA ATCAACTGTT TGATGCTATT AAAAACTATC ATCAGTTCAA TCCTAATGGC
ATTATGGCTC TCCATGCTTC AAGAAATGCC AGTTACAACG AAGTGATTCA AGTGCTCGAT
ATCCTCAAAC AAGTGGGCGG CGATCGCGTT GCCTTAGCGA CTTTACCAGG GTCATCGGAT
TCAAGCAATA ATTGGAGTAC GCCCCCCAAT GTTCCCTCAT CCCCAACGAC AGTACCTGGG
TTCCCTGGAA ATCCCTCTAA TTCCTGGCCG TCAACCACGC CGACAAATCC TAGCCAGGGA
GTAGGGACAT CCCCAGGAAG CGGAGTGAAT CCTTCTCTCC CATCACTCCC TAATTCCCCT
CAAACTGCCC CCCCAAATTA A
 
Protein sequence
MTQTTTDKTN NRKNQSPVHA RPLKLWQDQS HEKEVHIEIV PLIDVIFCIL TFFILGAVGL 
SRQQAISLDL PKAGTGTPQM REMLVVSLDD FGQVYLEKQP VTRNQLFDAI KNYHQFNPNG
IMALHASRNA SYNEVIQVLD ILKQVGGDRV ALATLPGSSD SSNNWSTPPN VPSSPTTVPG
FPGNPSNSWP STTPTNPSQG VGTSPGSGVN PSLPSLPNSP QTAPPN