| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2856 |
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| Symbol | |
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| ID | 8392183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8802 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013161 |
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| Strand | - |
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| Start bp | 2880508 |
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| End bp | 2882157 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644980806 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003138541 |
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| Protein GI | 257060653 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0279875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT CCCCTAATTC TTCCCATGAA AACCTGGACT ATCAGCAACC AGTGAACGGT
TCCATTTCTG AAATGGGGTC TGAAGTCTCC CAAGAAGACA TAACCTCAAT TTATGGGGGT
GTCGTTGGGT CTAGCCTACC GATATCTTCT ATGGGGGTAT CTTCGGCCTA TCCTCTCCCG
ACTCCCCAAA CCGAACCCAA GGTGACAGTC CCCCGTTGGT CTCCATCCGT CCACGATCTT
CTAGACCAGC CCCCCGCTAG TTTACCCCAA CGGTTAATCT ATGGGGGGAT CGCCTTTTGT
CTCGCTTTTG GAACTTGGGC TTGGTTTGGA ACCATCGAAG AAGTGGGTCA TGCTCAGGGA
AAATTAATTC CCCAAGGAGA AACCTACAAA ATTCAACCGA TAGAACTGGG CAAAGTCAAA
AGCATTGAGG TCAAAGCAGG GGAAGAAGTT CAGGCCGGCC AGGTCATTAT GGAATTGGAT
ACGGAGTTAG CGCAAAAAGA AGTTGAGCAA CACCAACAAA TGCTCGCCGC TTATCAACTG
GAGTTAGCGC AACAACAAAT GTTGTTAGAA AGGGTACAAT TAGAAGCCCA AACCCGCGCT
GCCATGGCTT CAGCCGAACA AAATGCCCAA CGGTCAGCGA TCGCGTTAAC CCAAGAAAAA
ATCGCCACGA CCCGTCACCT GTTGGGTCAA CAGCAGTCAG AAGCTTTGGC CTATCGCTCT
CGACAACGGC AGTTACAACC CCTAACCTCA ACGGCTCACG AACGCTTAGA GCAGCTTCAA
GGGGAAGTTC TCGCCCATCA AGCGCGATTA GAACGGTTAA AACCCTTAGA AGAAGAGGGG
GCGGTTTCTC AAGATTATAT CTTTCAGGCT GAACAGGAAC TACGCCAAAC CCAACAACGC
ATTACCCAAA GTGTACTGCA AGAAGTCCCC AGTACCCAAG AACAACTGTT TCAAGCGGAT
CAGTCGTTAC GCGACTTACA ACGGCAGATA ACGGAAAATA AAGGGGATCT AACGGCAGCT
TTTAAAGATG CGGAGCGACT TACGGCAGAA TTACATCAAA AACAAGCTCA GGCTGAACAA
ATGCAGTTGG AAGCCCAACA GAAAGCCCAA GAACTTGAAG TTGCCATTAC CCAACTCAGA
GGCAAAATCG CTGACACTCA AACCTTGCTC CTCGCTGCTC AAGCGAAGCT TAAGTATAAG
TTTTTGAAGG CTCCTGTGGA TGGGGTTGTG TTGTCCTTGG ATGTGAAGCG TACCGGAGAA
GTGATCGAAG CCGGGAAAAT TGTCGCACAA GTTGCGCCCA ATGGCGTTCC TTTGGTGTTA
TCTGCGCTAC TGCCTAACCG TGAAGCGGGC TTTGTCGAAT TGGGAATGCC CGTACAGGTT
AAGTTAGATG CCTACCCCTA TCAAGATTAC GGCATTGTTT CAGGCCAGGT AACGAAGATT
AGCGAAGATG CTGAGTCTGA CGAAAAATTA GGGGAAGTGT ATCGGGTAGA AGTGGACTTA
GATCGGGATT ATATCCAAGA CAATCAGCAA AAAATCGCTT TTAAAGCAGG TCAGACGGGA
ACGGCTGACA TTGTTATTCG CCGCCGACGG ATTATTGATA TCTTAATCGA TCCTATTAAG
AAAATCCAAG AAGATGGCAT CAAGCTGTAA
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| Protein sequence | MKLSPNSSHE NLDYQQPVNG SISEMGSEVS QEDITSIYGG VVGSSLPISS MGVSSAYPLP
TPQTEPKVTV PRWSPSVHDL LDQPPASLPQ RLIYGGIAFC LAFGTWAWFG TIEEVGHAQG
KLIPQGETYK IQPIELGKVK SIEVKAGEEV QAGQVIMELD TELAQKEVEQ HQQMLAAYQL
ELAQQQMLLE RVQLEAQTRA AMASAEQNAQ RSAIALTQEK IATTRHLLGQ QQSEALAYRS
RQRQLQPLTS TAHERLEQLQ GEVLAHQARL ERLKPLEEEG AVSQDYIFQA EQELRQTQQR
ITQSVLQEVP STQEQLFQAD QSLRDLQRQI TENKGDLTAA FKDAERLTAE LHQKQAQAEQ
MQLEAQQKAQ ELEVAITQLR GKIADTQTLL LAAQAKLKYK FLKAPVDGVV LSLDVKRTGE
VIEAGKIVAQ VAPNGVPLVL SALLPNREAG FVELGMPVQV KLDAYPYQDY GIVSGQVTKI
SEDAESDEKL GEVYRVEVDL DRDYIQDNQQ KIAFKAGQTG TADIVIRRRR IIDILIDPIK
KIQEDGIKL
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