Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2671 |
Symbol | |
ID | 8391997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | + |
Start bp | 2698298 |
End bp | 2700124 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644980630 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_003138366 |
Protein GI | 257060478 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGTA AAATGATCAA CAAAACCCGC CGAAAATTCC GCCTTCCCTC CATTTTGATT TCCTTTTTGG TATTGCAACT AGCGGGAACG GTAGGGTTAG TTCTCTCCCT ATCCTGGTAC AATAGCCGAG CAACAGCGCG GGATCTGGCC GCTCAGTTAC GTCAGGAATT AATTGCTCGC ATCGATCAAC AGCTTAAATC CTATGTTGAG ATTCCCCACG CGATTAATCG TATTAACGGA AGTGCAATGT TAACGGGAGA TTTGCAGATT GCAACGGGAA CAGGCTTTAA TCAACTCTGG GAACAGGCGA AAATCTATCC GAATACTAAT TTAATTTATT GTGGCAGTGA AAGAGATGGA TCGTTGGTGG GGGTAGGACG AGAACCCGAT CATATACCTT TGCAATTGGT GATGTATAAC CAATCGACTA ACTATCGCGG ACAGTATTAT GATTTGAATC AGTGGGGCGA TCGCACTATC TTAAAACAGA CAGGGACTAA ACTCTACGAT GCGCGGAAGC GTCCTTGGTA CCAAACAGCC AAACAAAACA GAGACGCTAC CTGGAGTGAA ATTTATCTCG ATTTCGATAC CCAATTACCC ACCATCACCG CTAGTACCCC GATTTATGAT CGCACAGGTC AAACGTTAAT CGGGGTGTGT GCCACGGATT TTATTTTACC CGCCGAGATG AGTCGCTTTT TGCGATCGCT CAAAGTGGGT CAATCAGGAC AAACCTTTAT TATGAAGCGA TCAGGGACGC TGGTAGCTTC CTCGACCCCA GAAAAGTTGT TTGAAGGAGA AGGGGATCAG GTGCGTCATC TGTCGGCGAT CGAGAGCAAT AGTGCCTTAA TTCGGGGGAC AGCGCAGTAT TTACAGGATC GCTTTGATAA CCTTAAGGGA TTAGAGCAAG TTAAACAACT CGAATTTACC TTAGATGGAG AACGGCAATT TGTCCAGATT TTACCCTTTC AAGATAAACG AGGTATTGAT TGGTTAACGG TGGTCGTCGT GCCAGAAAAG GATTTTCTGG CACAAATTAA TCAAAATACT CGCAATACCC TTGTTTTATC CTTAGTCGCT TTAGCAGCAG CGATCGCGAT CGGAATCATC ACGTCTCGTT GGGTGACTCG TCCCATTTTG CGGGTTTCTC AAGCTTCTAA TGAATTAGCT CATGGCAACT TGGATCAGCA TTTAGACTCT AGTTTTATTA GTGAAATTAA CACGCTGGCT AATTCTTTTA ACCGCATGGC AGGTCAATTG AAAGACTCTT TTGAGACATT AGAACGCAAA AACCAAGAAT TACGCCTAGC AGAAGAAAAC TATCGCAGTA TTTTTGAAAA CGCTTTAGAA GGAATTTTTC AATCTTCTCC TGAAGGAAGA TATCTTAAAG TTAATTCGGC CATGGCTAGA ATTTATGGCT ACGAATCCCC CCAAGAAATG TTAGAAACGA TTACCGATAT TAGCACACAA ATTTATGTCA ATCCCACCGA TCAGGCTCAG TTTCAAGACC AGATGAAAAA CAACGATCAA GCTCAAAATT TAGAGTATCA GGTGTATAGA AAAGATGGAG AAATTATCTG GATTCAAGAA GATACTAGGG CAGTTCGCAA TAGCAATGGT GAGTTATTAT ATTACGAAGG GATGATTGAG GATATTACTG AACGCAAACG CCGCGAAAAT GAATTAAGGC GACAATTAGA AGAGTTAAAG ATTGAAATTG ACCAGAAAAA ACGGCAAAAA GAAGTGGCGA TGCTAACAGA AAGTAGTTAC TTTCAAGAAG TCCAAGAAGA GATAGAAAAA GTTGATCTTG ATGAATTTTG GAGTTGA
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Protein sequence | MIGKMINKTR RKFRLPSILI SFLVLQLAGT VGLVLSLSWY NSRATARDLA AQLRQELIAR IDQQLKSYVE IPHAINRING SAMLTGDLQI ATGTGFNQLW EQAKIYPNTN LIYCGSERDG SLVGVGREPD HIPLQLVMYN QSTNYRGQYY DLNQWGDRTI LKQTGTKLYD ARKRPWYQTA KQNRDATWSE IYLDFDTQLP TITASTPIYD RTGQTLIGVC ATDFILPAEM SRFLRSLKVG QSGQTFIMKR SGTLVASSTP EKLFEGEGDQ VRHLSAIESN SALIRGTAQY LQDRFDNLKG LEQVKQLEFT LDGERQFVQI LPFQDKRGID WLTVVVVPEK DFLAQINQNT RNTLVLSLVA LAAAIAIGII TSRWVTRPIL RVSQASNELA HGNLDQHLDS SFISEINTLA NSFNRMAGQL KDSFETLERK NQELRLAEEN YRSIFENALE GIFQSSPEGR YLKVNSAMAR IYGYESPQEM LETITDISTQ IYVNPTDQAQ FQDQMKNNDQ AQNLEYQVYR KDGEIIWIQE DTRAVRNSNG ELLYYEGMIE DITERKRREN ELRRQLEELK IEIDQKKRQK EVAMLTESSY FQEVQEEIEK VDLDEFWS
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